Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00703 GGTGCAATTGAAGGTGGACGTGCAGGAGGCGTCAAATTCGTGTTTGGAGCAGGCCAAAACCGTAGAGCGTTGAGCATTATTAACCGGAATATTGCTGGAGCTCCCCCTTACCCATGTGCAGTCCACAAAAGAGGCTTGACAGAAAAACATGTTGTCTGCAATAAGTTCCCAAGCGTTCTGGTACATCGACCAATCACTAGAAATGAATTTTTTTTAAATGAGGAAGTGGAAATGGAAGATATAGCTGAAGAGTCAGTTGTGGACATAGACAGCCTTGATAAAAACAATCATCTTGCAGTTGTTGAGTACATTGATGATTTGTATGCCTACTACAGAAAAGTAGAGAGTTCTAGCTGCGTCCCACCAAACTACATGGCTCAGCAGGCTGATATTAACGAGAGAATGAGAGGTATTCTAGTCGATTGGCTAATCGAGGTGCATTACAAGTTTGAGTTGATGGAGGAGACTCTATACCTCACAGTCAACCTGATTGATAGATTCTTAGCAGTTCAGTCAGTGGTCAGGAAGAAATTGCAGCTGGTCGGAGTAACAGCAATGCTTCTCGCTTGCAAATATGAAGAAGTTTCGGTTCCTGTGGTGGAGGATCTCATCCTGATTTCTGATAAAGCTTACAGTAGAAAAGAAGTGCTTGAGATGGAAAAGTTGATGGTAAATTCTTTGCAGTTCAATCTCTCAGTTCCCACGTCTTATGTATTCATGAGGAGATTTCTCAAAGCTGCTCAATCCGACAAAAAGCTTGAACTACTGTCGTTCTTCATGATCGAACTCTGTCTGATAGAGTACGAAATGCTAAAGTTTCAGCCGTCTTTGTTAGCTGCATCTGCAATTTTCACAGCCCAGTGTTGTCTTAGTGGGTCTAAGCAATGGAGCAACACCAGTGTATTGCATAGTTGCTATTCAGAAGAGCAGCTTTTGGAATGCTCGCAGATGATGGTGGGTTTCCATCAGAAAGCTGCAACAGGGAAGCTGACAGGAGTTCACAAGAAGTATTCCACGTCCAAGTTTGGTTATGTCGCAAGAACAGAGCCTGCTAACTTTCTGTTGTGA 1068 43.07 GAIEGGRAGGVKFVFGAGQNRRALSIINRNIAGAPPYPCAVHKRGLTEKHVVCNKFPSVLVHRPITRNEFFLNEEVEMEDIAEESVVDIDSLDKNNHLAVVEYIDDLYAYYRKVESSSCVPPNYMAQQADINERMRGILVDWLIEVHYKFELMEETLYLTVNLIDRFLAVQSVVRKKLQLVGVTAMLLACKYEEVSVPVVEDLILISDKAYSRKEVLEMEKLMVNSLQFNLSVPTSYVFMRRFLKAAQSDKKLELLSFFMIELCLIEYEMLKFQPSLLAASAIFTAQCCLSGSKQWSNTSVLHSCYSEEQLLECSQMMVGFHQKAATGKLTGVHKKYSTSKFGYVARTEPANFLL 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 6423557 6425913 + Bma000913.1 Bma01g00703 75220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00703 355 CDD CYCLIN 135 224 IPR013763 -
Bma01g00703 355 CDD CYCLIN 232 319 IPR013763 -
Bma01g00703 355 SMART cyclin_7 238 320 IPR013763 -
Bma01g00703 355 SMART cyclin_7 141 225 IPR013763 -
Bma01g00703 355 SUPERFAMILY Cyclin-like 95 231 IPR036915 -
Bma01g00703 355 PANTHER CYCLIN-B2-3-RELATED 75 352 - -
Bma01g00703 355 Gene3D - 106 346 - -
Bma01g00703 355 Pfam Cyclin, C-terminal domain 234 349 IPR004367 -
Bma01g00703 355 Pfam Cyclin, N-terminal domain 106 232 IPR006671 -
Bma01g00703 355 SUPERFAMILY Cyclin-like 233 352 IPR036915 -
Bma01g00703 355 PANTHER CYCLINS 75 352 IPR039361 -
Bma01g00703 355 ProSitePatterns Cyclins signature. 136 167 IPR006671 -
Bma01g00703 355 Gene3D - 120 232 - -
Bma01g00703 355 SMART Cyclin_C_2 234 351 IPR004367 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00703 Bma-Chr1:6423557 Bma01g02702 Bma-Chr1:84443833 6.11E-88 dispersed
Bma04g00147 Bma-Chr4:1283818 Bma01g00703 Bma-Chr1:6423557 9.21E-55 dispersed
Bma03g00492 Bma-Chr3:3870749 Bma01g00703 Bma-Chr1:6423557 5.47E-66 transposed
Bma01g00703 Bma-Chr1:6423557 Bma01g02408 Bma-Chr1:81648498 1.76E-159 wgd
Bma01g00703 Bma-Chr1:6423557 Bma06g00078 Bma-Chr6:1217076 6.49E-135 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00703 K21777 - csv:101223199 512.686