Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma01g00703 | GGTGCAATTGAAGGTGGACGTGCAGGAGGCGTCAAATTCGTGTTTGGAGCAGGCCAAAACCGTAGAGCGTTGAGCATTATTAACCGGAATATTGCTGGAGCTCCCCCTTACCCATGTGCAGTCCACAAAAGAGGCTTGACAGAAAAACATGTTGTCTGCAATAAGTTCCCAAGCGTTCTGGTACATCGACCAATCACTAGAAATGAATTTTTTTTAAATGAGGAAGTGGAAATGGAAGATATAGCTGAAGAGTCAGTTGTGGACATAGACAGCCTTGATAAAAACAATCATCTTGCAGTTGTTGAGTACATTGATGATTTGTATGCCTACTACAGAAAAGTAGAGAGTTCTAGCTGCGTCCCACCAAACTACATGGCTCAGCAGGCTGATATTAACGAGAGAATGAGAGGTATTCTAGTCGATTGGCTAATCGAGGTGCATTACAAGTTTGAGTTGATGGAGGAGACTCTATACCTCACAGTCAACCTGATTGATAGATTCTTAGCAGTTCAGTCAGTGGTCAGGAAGAAATTGCAGCTGGTCGGAGTAACAGCAATGCTTCTCGCTTGCAAATATGAAGAAGTTTCGGTTCCTGTGGTGGAGGATCTCATCCTGATTTCTGATAAAGCTTACAGTAGAAAAGAAGTGCTTGAGATGGAAAAGTTGATGGTAAATTCTTTGCAGTTCAATCTCTCAGTTCCCACGTCTTATGTATTCATGAGGAGATTTCTCAAAGCTGCTCAATCCGACAAAAAGCTTGAACTACTGTCGTTCTTCATGATCGAACTCTGTCTGATAGAGTACGAAATGCTAAAGTTTCAGCCGTCTTTGTTAGCTGCATCTGCAATTTTCACAGCCCAGTGTTGTCTTAGTGGGTCTAAGCAATGGAGCAACACCAGTGTATTGCATAGTTGCTATTCAGAAGAGCAGCTTTTGGAATGCTCGCAGATGATGGTGGGTTTCCATCAGAAAGCTGCAACAGGGAAGCTGACAGGAGTTCACAAGAAGTATTCCACGTCCAAGTTTGGTTATGTCGCAAGAACAGAGCCTGCTAACTTTCTGTTGTGA | 1068 | 43.07 | GAIEGGRAGGVKFVFGAGQNRRALSIINRNIAGAPPYPCAVHKRGLTEKHVVCNKFPSVLVHRPITRNEFFLNEEVEMEDIAEESVVDIDSLDKNNHLAVVEYIDDLYAYYRKVESSSCVPPNYMAQQADINERMRGILVDWLIEVHYKFELMEETLYLTVNLIDRFLAVQSVVRKKLQLVGVTAMLLACKYEEVSVPVVEDLILISDKAYSRKEVLEMEKLMVNSLQFNLSVPTSYVFMRRFLKAAQSDKKLELLSFFMIELCLIEYEMLKFQPSLLAASAIFTAQCCLSGSKQWSNTSVLHSCYSEEQLLECSQMMVGFHQKAATGKLTGVHKKYSTSKFGYVARTEPANFLL | 355 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 6423557 | 6425913 | + | Bma000913.1 | Bma01g00703 | 75220 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma01g00703 | 355 | CDD | CYCLIN | 135 | 224 | IPR013763 | - | |
Bma01g00703 | 355 | CDD | CYCLIN | 232 | 319 | IPR013763 | - | |
Bma01g00703 | 355 | SMART | cyclin_7 | 238 | 320 | IPR013763 | - | |
Bma01g00703 | 355 | SMART | cyclin_7 | 141 | 225 | IPR013763 | - | |
Bma01g00703 | 355 | SUPERFAMILY | Cyclin-like | 95 | 231 | IPR036915 | - | |
Bma01g00703 | 355 | PANTHER | CYCLIN-B2-3-RELATED | 75 | 352 | - | - | |
Bma01g00703 | 355 | Gene3D | - | 106 | 346 | - | - | |
Bma01g00703 | 355 | Pfam | Cyclin, C-terminal domain | 234 | 349 | IPR004367 | - | |
Bma01g00703 | 355 | Pfam | Cyclin, N-terminal domain | 106 | 232 | IPR006671 | - | |
Bma01g00703 | 355 | SUPERFAMILY | Cyclin-like | 233 | 352 | IPR036915 | - | |
Bma01g00703 | 355 | PANTHER | CYCLINS | 75 | 352 | IPR039361 | - | |
Bma01g00703 | 355 | ProSitePatterns | Cyclins signature. | 136 | 167 | IPR006671 | - | |
Bma01g00703 | 355 | Gene3D | - | 120 | 232 | - | - | |
Bma01g00703 | 355 | SMART | Cyclin_C_2 | 234 | 351 | IPR004367 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g00703 | Bma-Chr1:6423557 | Bma01g02702 | Bma-Chr1:84443833 | 6.11E-88 | dispersed | |
Bma04g00147 | Bma-Chr4:1283818 | Bma01g00703 | Bma-Chr1:6423557 | 9.21E-55 | dispersed | |
Bma03g00492 | Bma-Chr3:3870749 | Bma01g00703 | Bma-Chr1:6423557 | 5.47E-66 | transposed | |
Bma01g00703 | Bma-Chr1:6423557 | Bma01g02408 | Bma-Chr1:81648498 | 1.76E-159 | wgd | |
Bma01g00703 | Bma-Chr1:6423557 | Bma06g00078 | Bma-Chr6:1217076 | 6.49E-135 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma01g00703 | K21777 | - | csv:101223199 | 512.686 |