Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00735 AAAATGTCTTCCACGTTCAGCGGCGATGAGACGGCACCTTTTTTTGGCTTCCTTGGAGCGGCCGCTGCGCTCATCTTCTCCTGTATGGGGGCTGCTTATGGAACGGCGAAAAGTGGTGTAGGGGTAGCATCGATGGGAGTGATGAGGCCTGAGCTGGTGATGAAATCGATTGTGCCCGTTGTTATGGCCGGAGTTTTGGGTATTTACGGTCTGATTATTGCTGTAATTATTAGCACTGGGATCAACCCCAAGGCCAAATCCTATTACCTTTTTGATGGCTACGCCCATTTGTCCTCTGGTCTTGCTTGTGGCCTCGCTGGTCTATCTGCTGGCATGGCTATTGGAATCGTCGGTGATGCCGGTGTTAGAGCGAATGCACAGCAGCCAAAGCTCTTTGTTGGGATGATTCTCATTCTTATCTTTGCTGAAGCACTTGCCCTGTATGGTCTCATTGTTGGCATCATTCTTTCTTCGCGAGCAGGTCAGTCCAGAGCCGAATAA 501 50.1 KMSSTFSGDETAPFFGFLGAAAALIFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 166
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 6732366 6733697 + Bma000948.1 Bma01g00735 75252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00735 166 CDD ATP-synt_Vo_c_ATP6C_rpt2 90 157 - -
Bma01g00735 166 SUPERFAMILY F1F0 ATP synthase subunit C 15 78 IPR035921 -
Bma01g00735 166 PRINTS Vacuolar ATP synthase 16kDa subunit signature 31 55 IPR000245 GO:0033179|GO:0046961|GO:1902600
Bma01g00735 166 PRINTS Vacuolar ATP synthase 16kDa subunit signature 57 81 IPR000245 GO:0033179|GO:0046961|GO:1902600
Bma01g00735 166 PRINTS Vacuolar ATP synthase 16kDa subunit signature 108 134 IPR000245 GO:0033179|GO:0046961|GO:1902600
Bma01g00735 166 PRINTS Vacuolar ATP synthase 16kDa subunit signature 135 158 IPR000245 GO:0033179|GO:0046961|GO:1902600
Bma01g00735 166 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 4 166 - -
Bma01g00735 166 CDD ATP-synt_Vo_c_ATP6C_rpt1 14 81 - -
Bma01g00735 166 SUPERFAMILY F1F0 ATP synthase subunit C 88 157 IPR035921 -
Bma01g00735 166 TIGRFAM V_ATP_synt_C: V-type ATPase, C subunit 14 122 IPR011555 GO:0033179|GO:0046961|GO:1902600
Bma01g00735 166 Pfam ATP synthase subunit C 18 77 IPR002379 GO:0015078|GO:0033177|GO:1902600
Bma01g00735 166 Pfam ATP synthase subunit C 98 156 IPR002379 GO:0015078|GO:0033177|GO:1902600
Bma01g00735 166 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 4 166 - -
Bma01g00735 166 Gene3D - 12 163 IPR035921 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g00735 Bma05g00155 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00735 Bma-Chr1:6732366 Bma01g02155 Bma-Chr1:78151121 6.80E-23 dispersed
Bma05g00418 Bma-Chr5:13219011 Bma01g00735 Bma-Chr1:6732366 3.56E-113 transposed
Bma12g00538 Bma-Chr12:21225905 Bma01g00735 Bma-Chr1:6732366 3.56E-113 transposed
Bma01g00735 Bma-Chr1:6732366 Bma05g00155 Bma-Chr5:4567325 1.83E-113 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00735 K02155 - tcc:18607679 288.115