Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma01g00742 | ATGGCGGATTCTAGCTCTGCTCCGGCAGGGAGAATGTGGTGTTCGGTGCCGGAAAAGATTCAACTGCACGGCGCCATGCTGGCGTTGCAGTTTGGCTATGCCGGATTTCACGTAGTTTCAAGATTTGCACTTAATATGGGCATCAGTAAACTCGTCTTCCCAGTTTACAGAAACATCATCGCTTTGATTCTTCTCCTTCCATTTGCATATTTCCTCGAAAAGAAGGAGAGGCCGCCCATTTCTCTAAATTTTCTCCTCCAGTTCTTCTGCCTCGCCCTCGTTGGAATCACAGCAAATCAAGGATTCTACTTGCTGGGTTTAGACAATACCTCCCCAACTTTTGCATCTGCAATACAGAACTCCGTACCGGCCATCACTTTTCTCATGGCCGTAATATTTTCTTTTCATCATTCCAGGATAGAACAAGTGAGATTAAACAGAAAAGATGGAATAGCCAAAGTGCTCGGAACCATCTGTTGTGTGGCTGGAGCCATGGTAATAACCCTATACAAGGGGCCAACAATATATAGCCCATCAGCTTCACTACAAACCACAAGAGCAGCAATGGCTGTATCTCTTGGCGATGCTCAGGGAAAGAACTGGACTCTGGGCTGTGTCTATCTGATCGGCCATTGCCTGTCGTGGTCAGGTTGGCTCGTTTTGCAGGCACCGGTTCTGAAAAAATACCCTGCTCGGCTTTCAGTCACTTCCTACACTTGCTTCTTTGGGCTCATACAGTTCGTCATTATAGCTGCTATCGTCGAGAGAGATGCTCAGGCTTGGCTTTTCCACTCTGGAGGAGAAATCTTTAGCGTCTTATATGCTGGAGTAGTGGCTTCTGGGATAGCATTTGCAGTTCAGATATGGTGCATTGACAGGGGTGGTCCAGTCTTCGTCGCTGTTTATCAACCTGTTCAAACTCTTGTTGTTGCGGTCATGGCTTCCATTGCTTTGGGAGAAGAGTTTTACTTGGGAGGGATCCTAGGAGCAGTGCTGATAATAGTGGGATTGTACTTCGTTCTTTGGGGTAAGAGCGAAGAGAAGAAATTCTTGCAGCAAAAGGCAGTGGTTCAGTCCGGTCCGGAGCACGGTGGTAGCCGTTCTATCAGGACGCCACTCCTCCCGTCGGCAATGGCAACTGAAGATGTTTAA | 1152 | 47.66 | MADSSSAPAGRMWCSVPEKIQLHGAMLALQFGYAGFHVVSRFALNMGISKLVFPVYRNIIALILLLPFAYFLEKKERPPISLNFLLQFFCLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAVIFSFHHSRIEQVRLNRKDGIAKVLGTICCVAGAMVITLYKGPTIYSPSASLQTTRAAMAVSLGDAQGKNWTLGCVYLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGLIQFVIIAAIVERDAQAWLFHSGGEIFSVLYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAVMASIALGEEFYLGGILGAVLIIVGLYFVLWGKSEEKKFLQQKAVVQSGPEHGGSRSIRTPLLPSAMATEDV | 383 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 6828221 | 6830092 | + | Bma000957.1 | Bma01g00742 | 75259 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma01g00742 | 383 | Pfam | EamA-like transporter family | 203 | 341 | IPR000620 | GO:0016020|GO:0016021 | |
Bma01g00742 | 383 | Pfam | EamA-like transporter family | 28 | 168 | IPR000620 | GO:0016020|GO:0016021 | |
Bma01g00742 | 383 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 56 | 171 | - | - | |
Bma01g00742 | 383 | MobiDBLite | consensus disorder prediction | 359 | 383 | - | - | |
Bma01g00742 | 383 | PANTHER | WAT1-RELATED PROTEIN | 14 | 360 | IPR030184 | GO:0016021|GO:0022857 | |
Bma01g00742 | 383 | PANTHER | WAT1-RELATED PROTEIN | 14 | 360 | - | - | |
Bma01g00742 | 383 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 248 | 345 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma01g02344 | Bma01g00742 | CCT | |
Bma01g00742 | Bma01g02344 | ECH | |
Bma01g02344 | Bma01g00742 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g00742 | Bma-Chr1:6828221 | Bma03g00405 | Bma-Chr3:3065559 | 1.30E-81 | dispersed | |
Bma06g00628 | Bma-Chr6:33417430 | Bma01g00742 | Bma-Chr1:6828221 | 4.39E-51 | dispersed | |
Bma14g00835 | Bma-Chr14:9363049 | Bma01g00742 | Bma-Chr1:6828221 | 5.44E-72 | transposed | |
Bma01g00742 | Bma-Chr1:6828221 | Bma01g02344 | Bma-Chr1:81025430 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma01g00742 | - | - | zju:107412692 | 619.387 |