Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00742 ATGGCGGATTCTAGCTCTGCTCCGGCAGGGAGAATGTGGTGTTCGGTGCCGGAAAAGATTCAACTGCACGGCGCCATGCTGGCGTTGCAGTTTGGCTATGCCGGATTTCACGTAGTTTCAAGATTTGCACTTAATATGGGCATCAGTAAACTCGTCTTCCCAGTTTACAGAAACATCATCGCTTTGATTCTTCTCCTTCCATTTGCATATTTCCTCGAAAAGAAGGAGAGGCCGCCCATTTCTCTAAATTTTCTCCTCCAGTTCTTCTGCCTCGCCCTCGTTGGAATCACAGCAAATCAAGGATTCTACTTGCTGGGTTTAGACAATACCTCCCCAACTTTTGCATCTGCAATACAGAACTCCGTACCGGCCATCACTTTTCTCATGGCCGTAATATTTTCTTTTCATCATTCCAGGATAGAACAAGTGAGATTAAACAGAAAAGATGGAATAGCCAAAGTGCTCGGAACCATCTGTTGTGTGGCTGGAGCCATGGTAATAACCCTATACAAGGGGCCAACAATATATAGCCCATCAGCTTCACTACAAACCACAAGAGCAGCAATGGCTGTATCTCTTGGCGATGCTCAGGGAAAGAACTGGACTCTGGGCTGTGTCTATCTGATCGGCCATTGCCTGTCGTGGTCAGGTTGGCTCGTTTTGCAGGCACCGGTTCTGAAAAAATACCCTGCTCGGCTTTCAGTCACTTCCTACACTTGCTTCTTTGGGCTCATACAGTTCGTCATTATAGCTGCTATCGTCGAGAGAGATGCTCAGGCTTGGCTTTTCCACTCTGGAGGAGAAATCTTTAGCGTCTTATATGCTGGAGTAGTGGCTTCTGGGATAGCATTTGCAGTTCAGATATGGTGCATTGACAGGGGTGGTCCAGTCTTCGTCGCTGTTTATCAACCTGTTCAAACTCTTGTTGTTGCGGTCATGGCTTCCATTGCTTTGGGAGAAGAGTTTTACTTGGGAGGGATCCTAGGAGCAGTGCTGATAATAGTGGGATTGTACTTCGTTCTTTGGGGTAAGAGCGAAGAGAAGAAATTCTTGCAGCAAAAGGCAGTGGTTCAGTCCGGTCCGGAGCACGGTGGTAGCCGTTCTATCAGGACGCCACTCCTCCCGTCGGCAATGGCAACTGAAGATGTTTAA 1152 47.66 MADSSSAPAGRMWCSVPEKIQLHGAMLALQFGYAGFHVVSRFALNMGISKLVFPVYRNIIALILLLPFAYFLEKKERPPISLNFLLQFFCLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAVIFSFHHSRIEQVRLNRKDGIAKVLGTICCVAGAMVITLYKGPTIYSPSASLQTTRAAMAVSLGDAQGKNWTLGCVYLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGLIQFVIIAAIVERDAQAWLFHSGGEIFSVLYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAVMASIALGEEFYLGGILGAVLIIVGLYFVLWGKSEEKKFLQQKAVVQSGPEHGGSRSIRTPLLPSAMATEDV 383
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 6828221 6830092 + Bma000957.1 Bma01g00742 75259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00742 383 Pfam EamA-like transporter family 203 341 IPR000620 GO:0016020|GO:0016021
Bma01g00742 383 Pfam EamA-like transporter family 28 168 IPR000620 GO:0016020|GO:0016021
Bma01g00742 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 171 - -
Bma01g00742 383 MobiDBLite consensus disorder prediction 359 383 - -
Bma01g00742 383 PANTHER WAT1-RELATED PROTEIN 14 360 IPR030184 GO:0016021|GO:0022857
Bma01g00742 383 PANTHER WAT1-RELATED PROTEIN 14 360 - -
Bma01g00742 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 345 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g02344 Bma01g00742 CCT
Bma01g00742 Bma01g02344 ECH
Bma01g02344 Bma01g00742 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00742 Bma-Chr1:6828221 Bma03g00405 Bma-Chr3:3065559 1.30E-81 dispersed
Bma06g00628 Bma-Chr6:33417430 Bma01g00742 Bma-Chr1:6828221 4.39E-51 dispersed
Bma14g00835 Bma-Chr14:9363049 Bma01g00742 Bma-Chr1:6828221 5.44E-72 transposed
Bma01g00742 Bma-Chr1:6828221 Bma01g02344 Bma-Chr1:81025430 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00742 - - zju:107412692 619.387