Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00750 ATGGCCACTCCAGTTGAACCTCCTAATGGGATTGGATCCCCAGGGAAGCATTACTATTCAATGTGGCAAACTTTGTTTGAGATTGATACGAAATACATACCCATCAAGCCTATTGGTCGCGGGGCATATGGCATTGTATGCTCTTCTGTGAATAGGGAAAATAACGAGAAAGTTGCCATAAAAAGGATTAACAATGCTTTTGAGAATCGTATTGATGCCCTTAGAACTTTGCGTGAACTGAAGCTACTTAGGCACCTTCGGCATGAAAACGTGATTGCCTTGAAAGATGTTATGATGCCTATTCATCGGACAAGCTTTAAGGATGTCTATTTGGTTTATGAACTTATGGATACAGATCTTCATCAGATAGTTAAGTCTCCTCAAGCTCTCTCCAATGATCATTGCCAGTATTTCCTGTTTCAGTTGCTACGAGGTTTGAAATATTTGCATTCAGCTAACATTCTTCATCGTGACCTGAAGCCTGGAAACCTTCTTGTTAATGCAAATTGTGACCTTAAAATATGTGATTTTGGGTTAGCACGTACAAGCAAGGGCAAGAATCAATTTATGACTGAGTATGTTGTGACTCGCTGGTATCGAGCTCCAGAGCTTCTCCTTTGCTGTGACTATTATGGAACATCAATTGACGTATGGTCTGTGGGATGCATTTTTGCAGAGCTTCTTGGTAGAAAACCTATCTTCCCCGGTACTGAGTGTCTGAATCAGCTCAAACTCATTATAAACATCCTAGGCAGCCAGAGGGAGGAGGATCTGGAGTTTATAGACAATCCAAAAGCAAGAAAATACATCAAATCCCTTCCTTTCTCACTTGGAACCCCATTATCCCGTCTTTATCCCAATGCCAATCCTCTGGCCGTTGATCTACTGCAAAAAATGCTTATTTTCGACCCCTCAAAGCGAATAAGTGTGACTGATGCCCTCCAACACCCATACATGTCAGCCCTTTATGATCCAAATTCCAATCCTCCTGCTCAAGTACCACTTGATCTTGACATAGATGAGGAATTGGGAGAAGAAATGATAAGAGAGATGATGTGGTTGGAAATGCTACATTACCATCCTGAAGCTGTTGTGGCCATAGGAGAGGTGTGCTCCTAA 1119 41.91 MATPVEPPNGIGSPGKHYYSMWQTLFEIDTKYIPIKPIGRGAYGIVCSSVNRENNEKVAIKRINNAFENRIDALRTLRELKLLRHLRHENVIALKDVMMPIHRTSFKDVYLVYELMDTDLHQIVKSPQALSNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSKGKNQFMTEYVVTRWYRAPELLLCCDYYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSQREEDLEFIDNPKARKYIKSLPFSLGTPLSRLYPNANPLAVDLLQKMLIFDPSKRISVTDALQHPYMSALYDPNSNPPAQVPLDLDIDEELGEEMIREMMWLEMLHYHPEAVVAIGEVCS 372
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 6890977 6893078 - Bma000965.1 Bma01g00750 75267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00750 372 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 364 - -
Bma01g00750 372 CDD STKc_TEY_MAPK 26 361 - -
Bma01g00750 372 ProSiteProfiles Protein kinase domain profile. 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g00750 372 Gene3D Transferase(Phosphotransferase) domain 1 116 345 - -
Bma01g00750 372 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 364 - -
Bma01g00750 372 Pfam Protein kinase domain 35 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g00750 372 ProSitePatterns MAP kinase signature. 67 170 IPR003527 GO:0004707|GO:0005524|GO:0006468
Bma01g00750 372 ProSitePatterns Protein kinases ATP-binding region signature. 38 61 IPR017441 GO:0005524
Bma01g00750 372 Gene3D Phosphorylase Kinase; domain 1 19 353 - -
Bma01g00750 372 SMART serkin_6 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g00750 372 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Bma01g00750 372 SUPERFAMILY Protein kinase-like (PK-like) 24 326 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00750 Bma-Chr1:6890977 Bma03g01015 Bma-Chr3:11281522 3.20E-180 dispersed
Bma01g00750 Bma-Chr1:6890977 Bma03g00980 Bma-Chr3:10453722 1.98E-180 wgd
Bma01g00750 Bma-Chr1:6890977 Bma06g00112 Bma-Chr6:1573649 2.31E-114 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66259 PF00069 Pkinase 2.10E-70 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00750 K20535 - cit:102623819 684.871