Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00754 ATGTCTTCCTCATCGGTTGGAGAACGCCATTGTTACTTTTGTTTTTCTACTGCTTTTGTTCTCGGTGCTTTGCTATTATTAGTAGGTCAAGCGCTGAAGAAACTAATTCACTACTCCAATCGAGAGTGCATTGATGGTTTTCCTCCGGGAAACCGAGGATTTCCGTTGTTGGGAGAGACACTACAGTTTATGGCAGCGGTTAACGGTAGCAATGGGGTTTATGATTTTGTTCGAATTCGCTGCCTCCGATATGGGCACTGTTTTCAAACCCGAATATTTGGCGAAACCCATGTTTTCGTTTCAAGCACTGAATCTGCTAGGGTGATCTTGAACAACGAGTCTGGAAAATTCACTAAAAGATACTTAAAATCAATTGCAAAACTAGTTGGTGATTATAGCTTACTCTGTGCTTCTCATCAACAACACAAACTGATCCGAAACCGTCTGATCAATTTGTTCTCTACGACTTCCTTGTCATTGTTTGTCGAACAGTTTGATGAATTGGTCACTGAAGCTCTTGCAGTCTGGGAACATAAAAGTACTGTGGTTGTTCTTGATGAAGCTCTCAAGATATCTTGTAAGGCAATGTGCAAAATGCTGATTAGTTTAGAGAATGGGACTGAGTTGGAGTTGATGCAGAAGGAGGTAGCTTGTGTTTGTGAAGCAATGCTTGCTTTCCCCGTAAGGCTACCTGGTACTAGATTCTACAAAGGCCTCCAGGCACGAAAGAGAATCATGAAGATTCTTGACAAAGCAATAAATGAAAGAAGATCGTCAGAATCTTATCGTGATGATTTTCTGCAGCGCCTTTTGATGGAGGTTGACAATGGAGAATCCAGAGGACTCACAAATGAGGAAATAAATGAGCATCTTCAACTAGCTAAAAGAGCTTCATCAAGGTCATCTCTCAAGTTAGAAGATCTTAATGAAATGCCTTCTTCTTCTAAGGCAGTAAAGGAATCCTTAAGAATGGCATCCATAGTTCCATGGCTTCCAAGGCAAGCGCTCCAAGACTGCGAGATTGAAGGCTTCAAAATCAAGAAAGGGTGGAATGTTAATATTGACACAAGATCATTGCACCTTGACCATACACTTTTCAATGATCCCAACAAGTTTAATCCTTCAAGATTTGATGATGAGTCGAAACCATACAGTTTCATAGCGTTTGGGATGGGAGGAAGGCAATGCATGGGAATGCACATGGCCAAGTCCATGATGCTCATCTTCTTACACCATCTGGTCATCACTTACAGGTGA 1257 41.45 MSSSSVGERHCYFCFSTAFVLGALLLLVGQALKKLIHYSNRECIDGFPPGNRGFPLLGETLQFMAAVNGSNGVYDFVRIRCLRYGHCFQTRIFGETHVFVSSTESARVILNNESGKFTKRYLKSIAKLVGDYSLLCASHQQHKLIRNRLINLFSTTSLSLFVEQFDELVTEALAVWEHKSTVVVLDEALKISCKAMCKMLISLENGTELELMQKEVACVCEAMLAFPVRLPGTRFYKGLQARKRIMKILDKAINERRSSESYRDDFLQRLLMEVDNGESRGLTNEEINEHLQLAKRASSRSSLKLEDLNEMPSSSKAVKESLRMASIVPWLPRQALQDCEIEGFKIKKGWNVNIDTRSLHLDHTLFNDPNKFNPSRFDDESKPYSFIAFGMGGRQCMGMHMAKSMMLIFLHHLVITYR 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 6956800 6959238 + Bma000971.1 Bma01g00754 75271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00754 418 SUPERFAMILY Cytochrome P450 47 417 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00754 418 Gene3D Cytochrome P450 44 292 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00754 418 Pfam Cytochrome P450 48 289 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00754 418 Pfam Cytochrome P450 285 417 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00754 418 PRINTS E-class P450 group I signature 355 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00754 418 PRINTS E-class P450 group I signature 386 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00754 418 PRINTS E-class P450 group I signature 81 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00754 418 PRINTS E-class P450 group I signature 396 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00754 418 PRINTS E-class P450 group I signature 315 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00754 418 PANTHER CYTOCHROME P450, FAMILY 722, SUBFAMILY A, POLYPEPTIDE 1 289 417 - -
Bma01g00754 418 PANTHER CYTOCHROME P450, FAMILY 722, SUBFAMILY A, POLYPEPTIDE 1 20 289 - -
Bma01g00754 418 Gene3D Cytochrome P450 293 418 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00754 418 PANTHER CYTOCHROME P450 26 289 417 - -
Bma01g00754 418 PANTHER CYTOCHROME P450 26 20 289 - -
Bma01g00754 418 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 389 398 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00754 Bma-Chr1:6956800 Bma09g00093 Bma-Chr9:2502689 2.84E-56 dispersed
Bma01g02500 Bma-Chr1:82717924 Bma01g00754 Bma-Chr1:6956800 6.30E-77 transposed
Bma01g00754 Bma-Chr1:6956800 Bma06g00127 Bma-Chr6:1710317 8.23E-52 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00754 - - qsu:112011051 537.724