Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00764 ATGGACACAAGGGCGTACAGATTAAGTTGCTTGAAGGAAAGCAACGTCTTTGAAGTTGATTTTCCTGAAGTTTTGCAAGTGAAAACCACTCTTCTACAGGCAGCAAAAGAATCTTCAAATGAACATCAGTATCTAACTGTCAAAGCAAAGTCATTAACTAGAGTAGCAGCTGACCTTAGAGCAATTGACTGGCTTGAGAAGCTTCAAGTAGCAGGGTTTGTGCCAGAAAAAAACACGGTGTGGATTCTGGAAGGAATTCTCTACTATCTTTCACATTCACAAGCCATGCAAGTACTGACGACTATTGCTGACATGCGCACCATCACCCAAACAGTCCTCTTGGCAGATTTTATGAACAAACCATCAACAACACTTTCAAAATCTATTTACCACTTCTACAGTGATTGGCCTGATCATCTCCTGCCGTCTCTTGGCTATTCCAGTGTCACACTTTCACAGATTGGCGATCCTGATGCTAACTTTGGTCTCATGCATGATCCATTGAATCTGTTCAATAAACTTCGTCGCTTGCCAAGGTCAATACAAACCCACCCAGATGATGGCACACCTTGCAGCCGCTTATATCTGGTGCAGGCATGTGGTTCACCCAATTCATCAAATTCTGTAGAGAAAATCCACTAA 642 42.52 MDTRAYRLSCLKESNVFEVDFPEVLQVKTTLLQAAKESSNEHQYLTVKAKSLTRVAADLRAIDWLEKLQVAGFVPEKNTVWILEGILYYLSHSQAMQVLTTIADMRTITQTVLLADFMNKPSTTLSKSIYHFYSDWPDHLLPSLGYSSVTLSQIGDPDANFGLMHDPLNLFNKLRRLPRSIQTHPDDGTPCSRLYLVQACGSPNSSNSVEKIH 213
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 7047676 7048317 - Bma000983.1 Bma01g00764 75281

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00764 213 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE YKTD-RELATED 1 183 - -
Bma01g00764 213 Pfam Leucine carboxyl methyltransferase 1 103 IPR007213 GO:0008168|GO:0032259
Bma01g00764 213 PANTHER LEUCINE CARBOXYL METHYLTRANSFERASE 1 183 - -
Bma01g00764 213 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 197 IPR029063 -
Bma01g00764 213 Gene3D Vaccinia Virus protein VP39 1 156 IPR029063 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00764 - - - pper:18790258 345.51
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g943 . . . . . . . . . Cmo12g00420 . . . . . . . . . . . . . . . . . . . . . . . Cone17ag1340 Cone20ag0141 . . . . . Blo18g00816 . Bda01g01492 Bpe02g01688 . Bma01g00764 . . . . Cma12g00471 . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0014564 1 0 1 1 1 0 2 0 0 0 0 0 2 0 0 2 0 2 2 0 0 1 1 1 1 0 0 1 0 1 20
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bma01g00764 Bma_Chr01 FPKM 0.0 0.0 2.829894 2.759883 3.442982 2.28317 2.858439 19.284838 18.670919 18.296171