Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00774 ATGATCACAAGTAACCCACTTCTCTGCTTCTTCCTTCTCTTCTACCTCCCTCTCATCACTCCCCATCATTCACCCACCTGCGATAAATCATGCGCCCCCGATCAACCTCTCCATGACTTTCCTTACCCGGTCGGCTTCTCCTCTGGGTGCGAAATCCGCCTCAACTGCACCGATAAAGGTACCCCCATCATCGGCGATTTCCCTGTCCAATCGGTGACCTCCGAGATCATTAAAGTCGCCATCGAAGCTGAATGCTTTCGACCTTTTCTGAGAGTCAGTCAGCTATTCGGCACAAAGTTCGCTCCGACGAGCCGAAACGCTTTTTTGATGCAAAATTGCTCCTTCTCCGATTTAAGTTGTATGTTACCGGAGACCATGGTGAGGACCCGATTCGAGACACCGAATTGCAGTCTAAGCAACGGGAACGTAACCTGTTATTCACAGAACTCATCTGACGGCTTTATGGATTTCAGAAGCGTCTCCGGAACCCGATGCGAGTTTATATTGTCATCAATATCGGCGGAATCCTTAAACGGCACGACGGGAGTGTCGTTGGAGGTTCAGACTGCGGAGCTTGGGTGGTGGGTGGAAGGAAACTGCCGCTGCTCAAGCCATGCTAATTGTACGACGCTTCTCTCCCCCACAGACGGCCGGCCGGCGTATCGGTGTAAATGTAACTATGGGTATGTCGGGGACGGGTACTCCGCTGGAACAGGTTGCAAAAAAGATTCCTCCCACTGCTACCCGACGAGGTACATCAGCAGCCACTGTGGAGGCACAGCCAAGATCATCGTCCTCGTCGGAGGTATAGCTGGTGGAGCTCTTTTCATGGCGGCTGTTGGCTTAATTTACTGTTTTGTACGCCGAAGCTTTAAATCAAAAGCCAGAAGAATAGCAAAACGCCGCCTTTCAGAGGCGACAGGCACTTGCACTATCCCCATTTACGCATACAAAGAAATCGAAAGAGCCACTGATTTCTTCTCTGACAAATACCGTCTCGGCACCGGAGCTTACGGAACAGTCTACGCCGCTAAATTACCCCGCTCCGACGAATGGGTCGCCGTCAAAAGATTAAAAAACAGAGACACTGACAGTATTGAGCAAGTAATGAACGAAGTCAAGCTTCTTTCTTCAGTCAACCACCCGAATCTTGTCCGCCTCCTTGGCTGCTCCGTCGAGAAGGGCGAGCAAATCCTTGTTTATGAATTCATGCCCAACGGAACACTTTCTCAGCATTTACAGAGAGAGGGAGGAAAAGGGCTTCCTTGGGAAACTCGTCTAAGAATCGCCATTGAAACAGCTCAAGCTATTTCCCACCTTCACTCTGCAACAAACCCGCCGATTTTTCACAGAGACATTAAATCCAGCAACATTCTACTGGACCAGAATTTCAAATCGAAGGTTGCCGATTTCGGACTTTCTCGACTAGGATTGACAGAATCGTCGCACATATCGACGGCCCCACAGGGTACTCCGGGCTATCTCGATCCTCAATATCATCAAAACTTCCATCTTTCCGACAAAAGCGACGTTTACAGCTTCGGCGTTGTTCTGCTTGAGATAATAACAGGGTTGAAAGTTGTAGACTTTTCCCGACCGAAAGATGAAGTAAATCTTGCTTCTCTAGGAACAGAGAGAATCAGAAATGGGCGACTAGAGGAGATCATTGATCCGTTTTTGGATCAAAGCCGGGAGGGTTTGACGATTTCATCTGTGCGAAAGGTGGCAGAGCTGGCTTTCAGATGTCTGGCGTTTGATCGGGACGTGAGACCCTCCATGACCGAAGTAGCAGCGGAATTGGACCAGATCGGGCTGATCCAGTCCCGTGCTTCATCGCTGGTATTTTCTTCTTCTTCATCATCAAACTCCAGTGAGAAGATATTAAGCAAAAAGGTGGATGCTGATGATTTAGGAGTTTCAGTTCAGAAGCCATGGCTAAGTAGTAGTGAAAAGAGCTCCCCTTCGTCCACTGGCTTGCTCAGTAACGTAATCCTATGA 1998 49.0 MITSNPLLCFFLLFYLPLITPHHSPTCDKSCAPDQPLHDFPYPVGFSSGCEIRLNCTDKGTPIIGDFPVQSVTSEIIKVAIEAECFRPFLRVSQLFGTKFAPTSRNAFLMQNCSFSDLSCMLPETMVRTRFETPNCSLSNGNVTCYSQNSSDGFMDFRSVSGTRCEFILSSISAESLNGTTGVSLEVQTAELGWWVEGNCRCSSHANCTTLLSPTDGRPAYRCKCNYGYVGDGYSAGTGCKKDSSHCYPTRYISSHCGGTAKIIVLVGGIAGGALFMAAVGLIYCFVRRSFKSKARRIAKRRLSEATGTCTIPIYAYKEIERATDFFSDKYRLGTGAYGTVYAAKLPRSDEWVAVKRLKNRDTDSIEQVMNEVKLLSSVNHPNLVRLLGCSVEKGEQILVYEFMPNGTLSQHLQREGGKGLPWETRLRIAIETAQAISHLHSATNPPIFHRDIKSSNILLDQNFKSKVADFGLSRLGLTESSHISTAPQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLLEIITGLKVVDFSRPKDEVNLASLGTERIRNGRLEEIIDPFLDQSREGLTISSVRKVAELAFRCLAFDRDVRPSMTEVAAELDQIGLIQSRASSLVFSSSSSSNSSEKILSKKVDADDLGVSVQKPWLSSSEKSSPSSTGLLSNVIL 665
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 7119566 7121866 - Bma000997.1 Bma01g00774 75291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00774 665 ProSiteProfiles Protein kinase domain profile. 327 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g00774 665 Gene3D Phosphorylase Kinase; domain 1 313 403 - -
Bma01g00774 665 MobiDBLite consensus disorder prediction 644 665 - -
Bma01g00774 665 ProSitePatterns Protein kinases ATP-binding region signature. 333 356 IPR017441 GO:0005524
Bma01g00774 665 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 25 629 IPR045274 GO:0007166
Bma01g00774 665 SUPERFAMILY Protein kinase-like (PK-like) 308 600 IPR011009 -
Bma01g00774 665 SMART serkin_6 327 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g00774 665 Gene3D Transferase(Phosphotransferase) domain 1 404 618 - -
Bma01g00774 665 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 14 25 629 - -
Bma01g00774 665 Pfam Protein kinase domain 329 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g00774 665 Gene3D Laminin 200 235 - -
Bma01g00774 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Bma01g00774 665 CDD STKc_IRAK 333 603 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00774 Bma-Chr1:7119566 Bma09g00327 Bma-Chr9:28302473 0 dispersed
Bma01g00774 Bma-Chr1:7119566 Bma03g00899 Bma-Chr3:8936250 4.89E-88 transposed
Bma01g00774 Bma-Chr1:7119566 Bma01g01132 Bma-Chr1:11959396 6.06E-84 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66260 PF00069 Pkinase 2.30E-45 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00774 - - jre:108980934 783.867