Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma01g00775 | ATGCTTCTTATCTCAAACCCTATGATGAAAGCTTCGTCTCCTTATCCCGACCTCTCCTTGAATATCAGTCCTCCATTTTTACCAGACACTGAAGATAATCAAGTCTCCAGCAAACCAGTAAACTGTGATCGAAGCTCTCCCACGTATTCCAGCAGCAGTACTGGAAGCGATTTAAGCCATGAAAACAGCTTATTCCGCTCAGAGAAGATGAGTTACTGCGTGGGTCCCAGTCAGTTGAGTTTGGGGATTGAAATGGCGGAGTTGGGCTCTGCGACGGTTCAAACGCCCAAAAACAACTACACTCGCCGTTTTACGCAGCAACCTTTTATCGACTGCCGGGAATTCAAAAGAAGCGACAAGATAATCAGTGGTGGAAAAAGAAGCATCAGAGCTCCCAGGATGCGATGGACCACGACCCTCCACGCGCATTTTGTACATGCGGTTCAGCTACTCGGCGGCCATGAAAGGGCCACACCAAAATCAGTGTTAGAGTTGATGAACGTGAAAGATCTAACCCTAGCTCACGTGAAGAGTCACTTGCAGGTATCTAGGGTTACAGATTTTTTCAATCTATACTTGATTTCAAATGATGATGAAATTGATAAACTTTTGGGGATTCGTTTTGTAGTCTGCTGCCTTTCTCGCTCATCATTATTGAACTTTCATAATTTTCAAGATTCATTTGTAGTGGGGAGGACAAAAGGGTATCTAGAAAGTAGTCTTCACCATTTCTACCTTTTTTGTTAA | 747 | 43.78 | MLLISNPMMKASSPYPDLSLNISPPFLPDTEDNQVSSKPVNCDRSSPTYSSSSTGSDLSHENSLFRSEKMSYCVGPSQLSLGIEMAELGSATVQTPKNNYTRRFTQQPFIDCREFKRSDKIISGGKRSIRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQVSRVTDFFNLYLISNDDEIDKLLGIRFVVCCLSRSSLLNFHNFQDSFVVGRTKGYLESSLHHFYLFC | 248 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 7135120 | 7135971 | - | Bma000998.1 | Bma01g00775 | 75292 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma01g00775 | 248 | Gene3D | - | 131 | 188 | - | - | |
Bma01g00775 | 248 | PANTHER | TRANSCRIPTION FACTOR KAN4-RELATED | 9 | 184 | - | - | |
Bma01g00775 | 248 | SUPERFAMILY | Homeodomain-like | 129 | 183 | IPR009057 | - | |
Bma01g00775 | 248 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 132 | 185 | IPR006447 | GO:0003677 | |
Bma01g00775 | 248 | PANTHER | TRANSCRIPTION FACTOR KAN2-RELATED | 9 | 184 | IPR044847 | GO:0000976|GO:0006355|GO:0010158 | |
Bma01g00775 | 248 | MobiDBLite | consensus disorder prediction | 23 | 61 | - | - | |
Bma01g00775 | 248 | MobiDBLite | consensus disorder prediction | 26 | 61 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g00775 | Bma-Chr1:7135120 | Bma14g00077 | Bma-Chr14:1033789 | 3.84E-30 | dispersed | |
Bma01g00775 | Bma-Chr1:7135120 | Bma01g01166 | Bma-Chr1:12844871 | 4.96E-29 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
56673 | None | None | None | None | Bma | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma01g00775 | - | - | mesc:110615067 | 206.838 |