Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00775 ATGCTTCTTATCTCAAACCCTATGATGAAAGCTTCGTCTCCTTATCCCGACCTCTCCTTGAATATCAGTCCTCCATTTTTACCAGACACTGAAGATAATCAAGTCTCCAGCAAACCAGTAAACTGTGATCGAAGCTCTCCCACGTATTCCAGCAGCAGTACTGGAAGCGATTTAAGCCATGAAAACAGCTTATTCCGCTCAGAGAAGATGAGTTACTGCGTGGGTCCCAGTCAGTTGAGTTTGGGGATTGAAATGGCGGAGTTGGGCTCTGCGACGGTTCAAACGCCCAAAAACAACTACACTCGCCGTTTTACGCAGCAACCTTTTATCGACTGCCGGGAATTCAAAAGAAGCGACAAGATAATCAGTGGTGGAAAAAGAAGCATCAGAGCTCCCAGGATGCGATGGACCACGACCCTCCACGCGCATTTTGTACATGCGGTTCAGCTACTCGGCGGCCATGAAAGGGCCACACCAAAATCAGTGTTAGAGTTGATGAACGTGAAAGATCTAACCCTAGCTCACGTGAAGAGTCACTTGCAGGTATCTAGGGTTACAGATTTTTTCAATCTATACTTGATTTCAAATGATGATGAAATTGATAAACTTTTGGGGATTCGTTTTGTAGTCTGCTGCCTTTCTCGCTCATCATTATTGAACTTTCATAATTTTCAAGATTCATTTGTAGTGGGGAGGACAAAAGGGTATCTAGAAAGTAGTCTTCACCATTTCTACCTTTTTTGTTAA 747 43.78 MLLISNPMMKASSPYPDLSLNISPPFLPDTEDNQVSSKPVNCDRSSPTYSSSSTGSDLSHENSLFRSEKMSYCVGPSQLSLGIEMAELGSATVQTPKNNYTRRFTQQPFIDCREFKRSDKIISGGKRSIRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQVSRVTDFFNLYLISNDDEIDKLLGIRFVVCCLSRSSLLNFHNFQDSFVVGRTKGYLESSLHHFYLFC 248
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 7135120 7135971 - Bma000998.1 Bma01g00775 75292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00775 248 Gene3D - 131 188 - -
Bma01g00775 248 PANTHER TRANSCRIPTION FACTOR KAN4-RELATED 9 184 - -
Bma01g00775 248 SUPERFAMILY Homeodomain-like 129 183 IPR009057 -
Bma01g00775 248 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 132 185 IPR006447 GO:0003677
Bma01g00775 248 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 9 184 IPR044847 GO:0000976|GO:0006355|GO:0010158
Bma01g00775 248 MobiDBLite consensus disorder prediction 23 61 - -
Bma01g00775 248 MobiDBLite consensus disorder prediction 26 61 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00775 Bma-Chr1:7135120 Bma14g00077 Bma-Chr14:1033789 3.84E-30 dispersed
Bma01g00775 Bma-Chr1:7135120 Bma01g01166 Bma-Chr1:12844871 4.96E-29 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56673 None None None None Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00775 - - mesc:110615067 206.838