Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00805 ATGTCGACCCAGAATCGCCGTTCGTCGTTTTCGTCCTCTACGTCGTCTTCATTGGCGAAGAGGCAAGCGTCGTCGGAGAATATGGGGAAGGCTGCGGCGGTTCCGACTCATCTCGCAAAGAAGCGGGCGCCTCTCGGAAACATCACCAATTTGAAGGGTGCTCCGCACAGTGCGTCGCGAAGCTCTGTCCCTTCTTCTACTATGCATGTATTCAATTTTAGCTTCTTCTTTGTAGGCACCGCATACAACAAAATTTCCAAGGGTAAGAAATGTTCCCCTGCAGGAAATGGCAGACCAACCTTACAAGGAAGTCAGCTGCCTGCAATGGATAATGTTAAATCTACTTCAACACTTCCTCTCAAACCTACAACTTTCCCAAAATGTGAAGTGATCATCCCTTCCTTAGCAGTGATCCCACCTCCTAGCAGCATGGATGTTTCTCCAAGTAAATCAGATGGAAGTTCAGTTTCTTTGGATGGGACAATGTCTACTTCTGATTCCTTTAAGAGTCCTGAAATTGAGTACTTAGACAACAATGATGTACCCACTGTCGATCCAATCGAGAGGAAAGCATTAAGCAATCTCGACATTTCAGACCATCACGTAGACAAAACTGATGGAAAGCTTTGCAATAGAGATATGCTTTTTGACCATCAGAGAGACGAGAAATTTGTGGATATTGATAATAACTACGAAGATCCACAGATGTGTGCTACCATTGCTTGTGATATTTACAAGCATTTGCGCGCATCGGAGGAAAAGAAAAGGCCTTCCATTGATTTCATGGAGAGGATTCAGAAGGACATAAGTGCTAACATGCGTGCCATTTTAATCGATTGGCTTGTGGAGGTAGCAGAAGAATACAGATTAATCCCTGATACGCTCTATTTGACTGTAAATTACATTGATCGATATCTCTCTGGTAATGCAATGGACAGACAAAGATTACAGCTGCTTGGGGTTGCCTCCATGATGATTGCTTCGAAGTATGAGGAGATCTGTGCGCCACAGGTGGAAGAATTTTGTTATATTACAGACAATACATATTTTAAGGAAGAGGTATTGCAAATGGAATCATCTATTTTGAACTACTTGAAGCGATTTGTTCGTGTTGCTCAAGGAATAGATGAGGTTCCATCAATGCAAATCGAATGCTTAGCTAACTACCTTGCCGAGCTGTCGCTTATCGAATACAACATGCTTGTTTATTCTCCGTCACTCATCGCCGCTTCAGCCATTTTCTTAGCGAAGTTCATCCTTTGCCCAACTAAGAGACCATGGAACTCCACATTACAGCATTACACTCTTTACCAGCCTTGTGATCTGAGAGACTGCGTAAAGAACTTGCATAGACTGTGCTGTAGCAGTCCAACTTCTAGCCTACCAGCCATTAGAGAGAAATACAGCCAACACAAGTACAAACAGGTGGCTAAAAAACACTGTCCTCCAGTCTTACCTTCTGAGTTTTTCCACAATGAAATCCAAAGGATAAACTGCAAGTAG 1503 43.18 MSTQNRRSSFSSSTSSSLAKRQASSENMGKAAAVPTHLAKKRAPLGNITNLKGAPHSASRSSVPSSTMHVFNFSFFFVGTAYNKISKGKKCSPAGNGRPTLQGSQLPAMDNVKSTSTLPLKPTTFPKCEVIIPSLAVIPPPSSMDVSPSKSDGSSVSLDGTMSTSDSFKSPEIEYLDNNDVPTVDPIERKALSNLDISDHHVDKTDGKLCNRDMLFDHQRDEKFVDIDNNYEDPQMCATIACDIYKHLRASEEKKRPSIDFMERIQKDISANMRAILIDWLVEVAEEYRLIPDTLYLTVNYIDRYLSGNAMDRQRLQLLGVASMMIASKYEEICAPQVEEFCYITDNTYFKEEVLQMESSILNYLKRFVRVAQGIDEVPSMQIECLANYLAELSLIEYNMLVYSPSLIAASAIFLAKFILCPTKRPWNSTLQHYTLYQPCDLRDCVKNLHRLCCSSPTSSLPAIREKYSQHKYKQVAKKHCPPVLPSEFFHNEIQRINCK 500
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 7537800 7540887 - Bma001023.1 Bma01g00805 75322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00805 500 PANTHER CYCLINS 30 493 IPR039361 -
Bma01g00805 500 MobiDBLite consensus disorder prediction 144 165 - -
Bma01g00805 500 MobiDBLite consensus disorder prediction 141 165 - -
Bma01g00805 500 SMART cyclin_7 279 363 IPR013763 -
Bma01g00805 500 SMART cyclin_7 366 451 IPR013763 -
Bma01g00805 500 PANTHER CYCLIN-A1-1 30 493 - -
Bma01g00805 500 SUPERFAMILY Cyclin-like 361 484 IPR036915 -
Bma01g00805 500 MobiDBLite consensus disorder prediction 88 107 - -
Bma01g00805 500 MobiDBLite consensus disorder prediction 1 24 - -
Bma01g00805 500 Gene3D - 243 478 - -
Bma01g00805 500 SUPERFAMILY Cyclin-like 232 366 IPR036915 -
Bma01g00805 500 SMART Cyclin_C_2 359 482 IPR004367 -
Bma01g00805 500 Gene3D - 257 366 - -
Bma01g00805 500 ProSitePatterns Cyclins signature. 274 305 IPR006671 -
Bma01g00805 500 Pfam Cyclin, N-terminal domain 243 366 IPR006671 -
Bma01g00805 500 MobiDBLite consensus disorder prediction 1 63 - -
Bma01g00805 500 CDD CYCLIN 273 362 IPR013763 -
Bma01g00805 500 CDD CYCLIN 361 450 IPR013763 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g00805 Bma02g00210 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00805 Bma-Chr1:7537800 Bma02g00210 Bma-Chr2:2260698 3.63E-108 dispersed
Bma01g02152 Bma-Chr1:78043311 Bma01g00805 Bma-Chr1:7537800 1.62E-93 transposed
Bma01g00805 Bma-Chr1:7537800 Bma02g00209 Bma-Chr2:2255994 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00805 K06627 - qsu:112028095 627.861