Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma01g00805 | ATGTCGACCCAGAATCGCCGTTCGTCGTTTTCGTCCTCTACGTCGTCTTCATTGGCGAAGAGGCAAGCGTCGTCGGAGAATATGGGGAAGGCTGCGGCGGTTCCGACTCATCTCGCAAAGAAGCGGGCGCCTCTCGGAAACATCACCAATTTGAAGGGTGCTCCGCACAGTGCGTCGCGAAGCTCTGTCCCTTCTTCTACTATGCATGTATTCAATTTTAGCTTCTTCTTTGTAGGCACCGCATACAACAAAATTTCCAAGGGTAAGAAATGTTCCCCTGCAGGAAATGGCAGACCAACCTTACAAGGAAGTCAGCTGCCTGCAATGGATAATGTTAAATCTACTTCAACACTTCCTCTCAAACCTACAACTTTCCCAAAATGTGAAGTGATCATCCCTTCCTTAGCAGTGATCCCACCTCCTAGCAGCATGGATGTTTCTCCAAGTAAATCAGATGGAAGTTCAGTTTCTTTGGATGGGACAATGTCTACTTCTGATTCCTTTAAGAGTCCTGAAATTGAGTACTTAGACAACAATGATGTACCCACTGTCGATCCAATCGAGAGGAAAGCATTAAGCAATCTCGACATTTCAGACCATCACGTAGACAAAACTGATGGAAAGCTTTGCAATAGAGATATGCTTTTTGACCATCAGAGAGACGAGAAATTTGTGGATATTGATAATAACTACGAAGATCCACAGATGTGTGCTACCATTGCTTGTGATATTTACAAGCATTTGCGCGCATCGGAGGAAAAGAAAAGGCCTTCCATTGATTTCATGGAGAGGATTCAGAAGGACATAAGTGCTAACATGCGTGCCATTTTAATCGATTGGCTTGTGGAGGTAGCAGAAGAATACAGATTAATCCCTGATACGCTCTATTTGACTGTAAATTACATTGATCGATATCTCTCTGGTAATGCAATGGACAGACAAAGATTACAGCTGCTTGGGGTTGCCTCCATGATGATTGCTTCGAAGTATGAGGAGATCTGTGCGCCACAGGTGGAAGAATTTTGTTATATTACAGACAATACATATTTTAAGGAAGAGGTATTGCAAATGGAATCATCTATTTTGAACTACTTGAAGCGATTTGTTCGTGTTGCTCAAGGAATAGATGAGGTTCCATCAATGCAAATCGAATGCTTAGCTAACTACCTTGCCGAGCTGTCGCTTATCGAATACAACATGCTTGTTTATTCTCCGTCACTCATCGCCGCTTCAGCCATTTTCTTAGCGAAGTTCATCCTTTGCCCAACTAAGAGACCATGGAACTCCACATTACAGCATTACACTCTTTACCAGCCTTGTGATCTGAGAGACTGCGTAAAGAACTTGCATAGACTGTGCTGTAGCAGTCCAACTTCTAGCCTACCAGCCATTAGAGAGAAATACAGCCAACACAAGTACAAACAGGTGGCTAAAAAACACTGTCCTCCAGTCTTACCTTCTGAGTTTTTCCACAATGAAATCCAAAGGATAAACTGCAAGTAG | 1503 | 43.18 | MSTQNRRSSFSSSTSSSLAKRQASSENMGKAAAVPTHLAKKRAPLGNITNLKGAPHSASRSSVPSSTMHVFNFSFFFVGTAYNKISKGKKCSPAGNGRPTLQGSQLPAMDNVKSTSTLPLKPTTFPKCEVIIPSLAVIPPPSSMDVSPSKSDGSSVSLDGTMSTSDSFKSPEIEYLDNNDVPTVDPIERKALSNLDISDHHVDKTDGKLCNRDMLFDHQRDEKFVDIDNNYEDPQMCATIACDIYKHLRASEEKKRPSIDFMERIQKDISANMRAILIDWLVEVAEEYRLIPDTLYLTVNYIDRYLSGNAMDRQRLQLLGVASMMIASKYEEICAPQVEEFCYITDNTYFKEEVLQMESSILNYLKRFVRVAQGIDEVPSMQIECLANYLAELSLIEYNMLVYSPSLIAASAIFLAKFILCPTKRPWNSTLQHYTLYQPCDLRDCVKNLHRLCCSSPTSSLPAIREKYSQHKYKQVAKKHCPPVLPSEFFHNEIQRINCK | 500 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 7537800 | 7540887 | - | Bma001023.1 | Bma01g00805 | 75322 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma01g00805 | 500 | PANTHER | CYCLINS | 30 | 493 | IPR039361 | - | |
Bma01g00805 | 500 | MobiDBLite | consensus disorder prediction | 144 | 165 | - | - | |
Bma01g00805 | 500 | MobiDBLite | consensus disorder prediction | 141 | 165 | - | - | |
Bma01g00805 | 500 | SMART | cyclin_7 | 279 | 363 | IPR013763 | - | |
Bma01g00805 | 500 | SMART | cyclin_7 | 366 | 451 | IPR013763 | - | |
Bma01g00805 | 500 | PANTHER | CYCLIN-A1-1 | 30 | 493 | - | - | |
Bma01g00805 | 500 | SUPERFAMILY | Cyclin-like | 361 | 484 | IPR036915 | - | |
Bma01g00805 | 500 | MobiDBLite | consensus disorder prediction | 88 | 107 | - | - | |
Bma01g00805 | 500 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Bma01g00805 | 500 | Gene3D | - | 243 | 478 | - | - | |
Bma01g00805 | 500 | SUPERFAMILY | Cyclin-like | 232 | 366 | IPR036915 | - | |
Bma01g00805 | 500 | SMART | Cyclin_C_2 | 359 | 482 | IPR004367 | - | |
Bma01g00805 | 500 | Gene3D | - | 257 | 366 | - | - | |
Bma01g00805 | 500 | ProSitePatterns | Cyclins signature. | 274 | 305 | IPR006671 | - | |
Bma01g00805 | 500 | Pfam | Cyclin, N-terminal domain | 243 | 366 | IPR006671 | - | |
Bma01g00805 | 500 | MobiDBLite | consensus disorder prediction | 1 | 63 | - | - | |
Bma01g00805 | 500 | CDD | CYCLIN | 273 | 362 | IPR013763 | - | |
Bma01g00805 | 500 | CDD | CYCLIN | 361 | 450 | IPR013763 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma01g00805 | Bma02g00210 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g00805 | Bma-Chr1:7537800 | Bma02g00210 | Bma-Chr2:2260698 | 3.63E-108 | dispersed | |
Bma01g02152 | Bma-Chr1:78043311 | Bma01g00805 | Bma-Chr1:7537800 | 1.62E-93 | transposed | |
Bma01g00805 | Bma-Chr1:7537800 | Bma02g00209 | Bma-Chr2:2255994 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma01g00805 | K06627 | - | qsu:112028095 | 627.861 |