Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00841 ATGGGTCGTCGGAGGAGGAGTTTGTCGGAGCTCGGTTGCTCGCTGCTCGCTGCTTCAGAAATCCAAAATGATGATTCTTCAAGCACAACCACGGAGCCTTATATATCTCCAAATGGGAGACTGAAGCCGATTATTTCGAACTGGCAAAAGGGTGAGCTTCTGGGGCGAGGATCATTTGGATCGGTGTACGAAGGAATTTCTTGTGATGGGTTTTTTTTCGCTGTCAAGGAAGTTTCACTGCTTGATCAAAACAATCAGGAACAACAAAGTATTATACAGCTTCAGCAGGAGATTGCTCTTTTAAGTCACTTTGAGCACGAGAATATAGTGCAATATTACGGCACCGAGAAGACTGAATCACACCTATTCATTTTTCTTGAGCTTGTGACAAAAGGATCCCTTATGAAGCTTTATCAGACGTATCATCTTATAGATTCTCAAGTTTCTGCATATACAAGACAAATTTTGCATGGTTTGAAATATCTTCACGAACAAAACGTGGTTCACAGGGATATTAAATGTGCAAATATATTAGTGGATGCCAGTGGAGCAGTAAAGCTTGCCGATTTTGGGTTGGCAAAGGCAACAAAAATGAATGATATTAAATCCTGTAAGGGAACATTATTCTGGATGGCACCTGAGGTCGTTAATAGGAAGAACCAAGGATATGGTCACCCAGCTGATATTTGGAGCCTTGGTTGCACTGTATTGGAGATGTTAACAGGAAAACTTCCATACTCTGAGTTGGACAATCCAATGTCGGCATTGTTTGAAATTGGAAGTGGTAAGCTACCAGTTGTTCCAGATTCTCTATCAACGGATGCACGTGATTTTGTACTGCAGTGCTTACAGCCTAACCCACATGGCCGTCCATCTGCTGCTCAACTCTTAGAGCATCCATTTGTGAAGAGATCTATCCCTACGATATAA 930 42.04 MGRRRRSLSELGCSLLAASEIQNDDSSSTTTEPYISPNGRLKPIISNWQKGELLGRGSFGSVYEGISCDGFFFAVKEVSLLDQNNQEQQSIIQLQQEIALLSHFEHENIVQYYGTEKTESHLFIFLELVTKGSLMKLYQTYHLIDSQVSAYTRQILHGLKYLHEQNVVHRDIKCANILVDASGAVKLADFGLAKATKMNDIKSCKGTLFWMAPEVVNRKNQGYGHPADIWSLGCTVLEMLTGKLPYSELDNPMSALFEIGSGKLPVVPDSLSTDARDFVLQCLQPNPHGRPSAAQLLEHPFVKRSIPTI 309
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 7951419 7960174 - Bma001062.1 Bma01g00841 75358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00841 309 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Bma01g00841 309 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 15 306 - -
Bma01g00841 309 SUPERFAMILY Protein kinase-like (PK-like) 24 305 IPR011009 -
Bma01g00841 309 ProSitePatterns Protein kinases ATP-binding region signature. 54 76 IPR017441 GO:0005524
Bma01g00841 309 ProSiteProfiles Protein kinase domain profile. 48 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g00841 309 Pfam Protein kinase domain 49 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g00841 309 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 15 306 - -
Bma01g00841 309 Gene3D Transferase(Phosphotransferase) domain 1 45 308 - -
Bma01g00841 309 SMART serkin_6 48 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g00841 309 PIRSF ILK 13 299 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g02638 Bma01g00841 CCT
Bma01g00841 Bma02g00241 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00841 Bma-Chr1:7951419 Bma15g00785 Bma-Chr15:16763102 6.79E-80 dispersed
Bma01g00841 Bma-Chr1:7951419 Bma01g00844 Bma-Chr1:7981915 0 proximal
Bma03g00420 Bma-Chr3:3196793 Bma01g00841 Bma-Chr1:7951419 5.03E-14 transposed
Bma04g01702 Bma-Chr4:53259009 Bma01g00841 Bma-Chr1:7951419 7.08E-128 transposed
Bma13g00112 Bma-Chr13:1170563 Bma01g00841 Bma-Chr1:7951419 9.80E-59 transposed
Bma14g01892 Bma-Chr14:40447577 Bma01g00841 Bma-Chr1:7951419 1.35E-34 transposed
Bma14g01928 Bma-Chr14:41144676 Bma01g00841 Bma-Chr1:7951419 1.35E-34 transposed
Bma14g02057 Bma-Chr14:43912303 Bma01g00841 Bma-Chr1:7951419 4.35E-73 transposed
Bma01g00841 Bma-Chr1:7951419 Bma01g02638 Bma-Chr1:83891178 2.67E-146 wgd
Bma01g00841 Bma-Chr1:7951419 Bma02g00241 Bma-Chr2:2518061 2.08E-172 wgd
Bma01g00841 Bma-Chr1:7951419 Bma05g01388 Bma-Chr5:53297476 1.76E-22 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66263 PF00069 Pkinase 1.30E-69 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00841 K13414 - pop:7460930 447.203