Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00844 ATGGATTTGAAGAGTAGGAGGGGCAGGCCGAGGTTGGATCGCCGTAATGCGGCCAAGCACATTGAGTACGATGCACTGGCTTCATCTTCTTTGCCTGACGATTCTTCTGGATCGCTGCATACCCGCTCGCTTGAGCTCCCGGATAAAACGAGCTTCCGAATAGGGGGAACTGATGGGGAATTTGATCGTATATGTCGGAGTTTGGGGCTTTCAGGGCCGGACGACTTTACTATTCCTGCGTCGGCGTATCAATCTACGAGGATCCGTTCCTCGTCTGATCGTCTACCCAATTCCAGGCTGCATAAGTTGGATAACACCTCCGTGGAGGATGTGAAGGAGGAAGAAGACAGTGAAGCGGAAGCTGAGCTACTTGAGAGAGTAAGGGAATCGGTTAAAATTAGGGATTCGACTAAGTTACCTCGTTATGAAACAGCCGAGCTAAGTGGGAAAAGGATCGTCAGTGGTAGTAGTGGAGGAGGAGGAGGTGCTGGTGGTGGAATTAAGGGTGTTCGTCCACCATTGGTTAAGCCCCCGCCTTCTATGCGCCCTCCGGTTCATGATAATGCTTCCTCAACTTGGGACATTTTCAGGGATTTTGCTCCTAATGATGAAGTAAGATCTTCAGTGGTGGTTCAAGAAGGAAACGATTCTCCTTCCGAAGATAATCACGAAGATGGAGATGAATCCGAAGTGGGGGTCGTGGAAGGAGAAGAGGCTGGAGGTACAGATAGTCTTCGTGAACAGTCAAATTCACCTTCATTTTCAACTTCAAATGATGATGATTCTTCAAGCACAACCACGGAGCCTTATATATCTCCAAATGGGAGACTGAAGCGGACTATTTCGAACTGGCAAAAGGGTGAGCTTCTGGGGCGAGGATCATTTGGATCGGTGTACGAAGGAATTTCTGGTGATGGGTTTTTTTTCGCTGTCAAGGAAGTTTCACTGCTTGATCAAAACAATCAGGGACAACAAAGTATTATACAGCTTCAGCAGGAGATTGCTCTTTTAAGTCACTTTGAGCACGAGAATATAGTGCAATATTACGGCACTGAGAAGACTGAAGCACACCTATTCATTTTTCTTGAGCTTGTGACAAAAGGATCTCTTATGAAGCTTTATCAGACGTATCATCTTATAGATTCCCAAGTTTCTGCATATACAAGACAAATTTTGCATGGTTTGAAATATCTTCACGATCAAAACGTGGTTCACAGGGATATTAAATGTGCGAATATATTAGTGGATGCCAGTGGAGCAGTAAAGCTTGCCGATTTTGGGTTGGCAAAGGCAACAAAAATGAATGATATTAAATCCTGTAAGGGAACAGCATTCTGGATGGCACCTGAGGTCGTTAATAGGAGGAACCAAGGATATGGTCACCCAGCTGATATTTGGAGCCTTGGTTGCACTGTATTGGAGATGTTAACAGGCAAACTTCCATACTCTGAGTTGGACAATCCAATGTCGGCATTGTTTAAAATTGGAAGTGGTAAGCTACCAGTTGTTCCAGATTCTCTATCAACAGATGCACGTGATTTTGTACTGCAGTGCTTACAGCCTAACCCACATGGCCGTCCATCTGCTGCTCAACTCTTAGAGCATCCATTTGTGAAGAGATCTCTTCCTACTTCCTCAGGGCCTCAGTCGCCTCACTCATCTAGCAGAAGGAAATAA 1677 45.44 MDLKSRRGRPRLDRRNAAKHIEYDALASSSLPDDSSGSLHTRSLELPDKTSFRIGGTDGEFDRICRSLGLSGPDDFTIPASAYQSTRIRSSSDRLPNSRLHKLDNTSVEDVKEEEDSEAEAELLERVRESVKIRDSTKLPRYETAELSGKRIVSGSSGGGGGAGGGIKGVRPPLVKPPPSMRPPVHDNASSTWDIFRDFAPNDEVRSSVVVQEGNDSPSEDNHEDGDESEVGVVEGEEAGGTDSLREQSNSPSFSTSNDDDSSSTTTEPYISPNGRLKRTISNWQKGELLGRGSFGSVYEGISGDGFFFAVKEVSLLDQNNQGQQSIIQLQQEIALLSHFEHENIVQYYGTEKTEAHLFIFLELVTKGSLMKLYQTYHLIDSQVSAYTRQILHGLKYLHDQNVVHRDIKCANILVDASGAVKLADFGLAKATKMNDIKSCKGTAFWMAPEVVNRRNQGYGHPADIWSLGCTVLEMLTGKLPYSELDNPMSALFKIGSGKLPVVPDSLSTDARDFVLQCLQPNPHGRPSAAQLLEHPFVKRSLPTSSGPQSPHSSSRRK 558
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 7981915 7988862 - Bma001065.1 Bma01g00844 75361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00844 558 MobiDBLite consensus disorder prediction 146 189 - -
Bma01g00844 558 SUPERFAMILY Protein kinase-like (PK-like) 259 551 IPR011009 -
Bma01g00844 558 ProSitePatterns Serine/Threonine protein kinases active-site signature. 403 415 IPR008271 GO:0004672|GO:0006468
Bma01g00844 558 SMART serkin_6 284 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g00844 558 MobiDBLite consensus disorder prediction 210 276 - -
Bma01g00844 558 Gene3D Transferase(Phosphotransferase) domain 1 281 556 - -
Bma01g00844 558 ProSiteProfiles Protein kinase domain profile. 284 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g00844 558 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 4 103 - -
Bma01g00844 558 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 164 548 - -
Bma01g00844 558 Pfam Protein kinase domain 285 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g00844 558 MobiDBLite consensus disorder prediction 87 117 - -
Bma01g00844 558 MobiDBLite consensus disorder prediction 243 276 - -
Bma01g00844 558 MobiDBLite consensus disorder prediction 25 51 - -
Bma01g00844 558 MobiDBLite consensus disorder prediction 94 109 - -
Bma01g00844 558 ProSitePatterns Protein kinases ATP-binding region signature. 290 312 IPR017441 GO:0005524
Bma01g00844 558 MobiDBLite consensus disorder prediction 220 234 - -
Bma01g00844 558 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 164 548 - -
Bma01g00844 558 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 4 103 - -
Bma01g00844 558 MobiDBLite consensus disorder prediction 535 558 - -
Bma01g00844 558 MobiDBLite consensus disorder prediction 29 45 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00844 Bma-Chr1:7981915 Bma02g00241 Bma-Chr2:2518061 0 dispersed
Bma01g00841 Bma-Chr1:7951419 Bma01g00844 Bma-Chr1:7981915 0 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66264 PF00069 Pkinase 2.20E-68 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00844 K13414 - rcu:8274146 650.588