Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00847 ATGGGTTCTCTTTCGACTGAGAGTTCGAATGTGGAGAAAGAAGGAAGCCATGTTCATGTTGGCGAGGAAGGTAGAACCGGGAAGCTTCAATGGCTTCTGGATAGTCCAGAACCTCCCTCTATGTGGCATGAGTTCATTGGTTGTCTCAAAGAAGCTTTCGTTCCTCGTAGCAACAGACCTTCTTCTTCAGAGAAGCAGAAAGTATCTCTGCGTGTTTTTTCAGTTTTGCGAGGTGTTTTTCCGATTCTTAGTTGGGGAAGAAACTACAAGGCTTCCAAGTTTCGGAGTGATGTAATGGCCGGTTTAACTCTAGCCAGCCTTAGCATTCCTCAGGTTCTCTCTAGCTCTTACTCTCTCTCTCTAACTCTTTCTTTCTCTCTCTATAATTATGATGTTCTGCAGAGTATTGGGTATGCTAATTTGGCAAAGCTTGATCCACAGTATGGTTTATACACAAGCGTCGTTCCACCATTGATCTATTCCTTACTGGGAAGTTCAAGAGAGCTAGCAATAGGACCAGTGGCTGTGGTTTCTTTGCTTTTATCCTCCATGCTTGAGAAAATTCAAGACCCTTTTGCAGACCCGATTGCCTACAGAAAACTCGTCTTCACCGTCACTTTCTTTGCTGGATCATTTCAAGCAGCGTTTGGATTATTTAGGTTGGGGTTTTTGGTGAATTTTCTTTCGCATGCTGCAATTGTTGGATTCATGGGAGGAGCCGCCATTGTTATAGGCCTTCAACAGCTCAAAGGTCTTCTGGGTATCGCTCATTTCTCCACCAGCACAGATATTATCTCTGTCTTGCACTCTGTTCTTCAATCTTTTCACCACTCATGGTACCCTCTGAATTTTGTTCTTGGCTGTTCATTCTTCATCTTCCTTCTACTGGCGAGATTCATTGGAAGAAGAAACAAAAAGCTGTTCTGGCTACCAGCAATTGCTCCATTATTATCAGTTATATTATCGACCCTAATCGTGTTTTTGACAAAAGCTGATAAACATGGAGTTAAAATTGTGAAACATATTGATAGAGGTGTAAATCGCAGCTCTGTTCATCAGCTACAACTTCACGGCCCTCACGTATGGCAAGCTGCAAAAATTGGCCTGATATCTGCCCTCATCGCTCTCACTGAAGCTATTGCAGTGGGAAGATCTTTTGCTTCCATTAATGGCTACCACCTTGATGGTAATAAGGAAATGGTGGCCATGGGGTTCATGAACATCGTAGGCTCTTTCACTTCTTGTTATGTTGCCACTGGTTCTTTTTCAAGGACTGCAGTGAATTTCAGTGCGGGATGTGAGACAGTGGTGTCAAACGTTGTAATGGCGATAACGGTTATCGTGTCATTAGAATTGTTCACAAGATTCCTCTACTATACTCCCATGGCTATTCTTGCTTCCGTCATCTTATCGGCTTTACCGGGACTCATCGATCTGAATGAAGCTTATCACATATGGAAAGTTGACAAGCTTGATTTCTTAGCTTGCCTTGGAGCTTTTCTCGGGGTCTTGTTCGTTTCTGTTGAGATTGGTCTTCTCGCTGCGGTAGCAATTTCATTTGCAAAGATATTACTCAATTTTATTCGACCCGACATTGAATTGGTCGGAAGACTACCAACAACTGATATCTTCTGTAATGTCCGAGAATATCCTATGGCTACAAAAAATGGAGGCATTATCATTATTCGAATTGACACTGGATTCCTTTGTTTTGCTAATGCTAATTTTATCATAGACAAGGTTATGAGATGGATTGCAAAAGAAGAAGAAAAAGACGATGATTCTATTGCAGTTGAAAACGGGAAAGAAAACATCAAAGAAGTAGTTCTTGATATGACTAGCGTGATGAATGTTGATACTTCGGGAATTATCGCATTGGAGGAACTGCATAGGAAGCTTATTTCCATTGGCGTAGAATTAAATATAGCAAACCCAAGATGGGAAGTGATTCACAAGCTGAAGATGGTTAAGTTCATAGACAGAATTGGAGGCAGAGTTTTTGGGTCTGTTGCTGAAGCTGTCCAAGCTTGCTTGCCTACTTGA 2043 41.85 MGSLSTESSNVEKEGSHVHVGEEGRTGKLQWLLDSPEPPSMWHEFIGCLKEAFVPRSNRPSSSEKQKVSLRVFSVLRGVFPILSWGRNYKASKFRSDVMAGLTLASLSIPQVLSSSYSLSLTLSFSLYNYDVLQSIGYANLAKLDPQYGLYTSVVPPLIYSLLGSSRELAIGPVAVVSLLLSSMLEKIQDPFADPIAYRKLVFTVTFFAGSFQAAFGLFRLGFLVNFLSHAAIVGFMGGAAIVIGLQQLKGLLGIAHFSTSTDIISVLHSVLQSFHHSWYPLNFVLGCSFFIFLLLARFIGRRNKKLFWLPAIAPLLSVILSTLIVFLTKADKHGVKIVKHIDRGVNRSSVHQLQLHGPHVWQAAKIGLISALIALTEAIAVGRSFASINGYHLDGNKEMVAMGFMNIVGSFTSCYVATGSFSRTAVNFSAGCETVVSNVVMAITVIVSLELFTRFLYYTPMAILASVILSALPGLIDLNEAYHIWKVDKLDFLACLGAFLGVLFVSVEIGLLAAVAISFAKILLNFIRPDIELVGRLPTTDIFCNVREYPMATKNGGIIIIRIDTGFLCFANANFIIDKVMRWIAKEEEKDDDSIAVENGKENIKEVVLDMTSVMNVDTSGIIALEELHRKLISIGVELNIANPRWEVIHKLKMVKFIDRIGGRVFGSVAEAVQACLPT 680
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 8011357 8014826 + Bma001068.1 Bma01g00847 75364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00847 680 PANTHER LOW AFFINITY SULFATE TRANSPORTER 3-LIKE 125 678 - -
Bma01g00847 680 PANTHER LOW AFFINITY SULFATE TRANSPORTER 3-LIKE 19 128 - -
Bma01g00847 680 SUPERFAMILY SpoIIaa-like 553 677 IPR036513 -
Bma01g00847 680 Pfam STAS domain 550 673 IPR002645 -
Bma01g00847 680 MobiDBLite consensus disorder prediction 1 20 - -
Bma01g00847 680 CDD STAS_SulP_like_sulfate_transporter 550 667 - -
Bma01g00847 680 Pfam Sulfate permease family 130 497 IPR011547 GO:0016021
Bma01g00847 680 ProSitePatterns SLC26A transporters signature. 146 167 IPR018045 GO:0008271|GO:0008272
Bma01g00847 680 ProSiteProfiles STAS domain profile. 567 677 IPR002645 -
Bma01g00847 680 Gene3D STAS domain 529 679 IPR036513 -
Bma01g00847 680 TIGRFAM sulP: sulfate permease 134 666 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bma01g00847 680 PANTHER SULFATE TRANSPORTER 125 678 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bma01g00847 680 PANTHER SULFATE TRANSPORTER 19 128 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00847 Bma-Chr1:8011357 Bma15g01025 Bma-Chr15:40744562 0 dispersed
Bma01g00847 Bma-Chr1:8011357 Bma01g02625 Bma-Chr1:83812419 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00847 K17469 - cit:102620800 916.376