Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00863 TCTAAAGAAATGGATTTGATTGAAGGAGTCGGAGAGAGCTCGTCGCCGCCTAGGAGCTTCGGAGGTTTCTCGAACCACGATGTGCGGCTCGACGTGTATAACCGCCTAGTGGAGAGTAGACACGAGGACGCTGTGTGCAATCCCGAGTTTCGCGAGCAGCTGGACGCTCACTTCCATCGCTTACCTCCTAGTTATGGATTAGATGTCAATATGGATAGAGTGGAGGATGTTTTGTTACATCAAAAGCTGCTTGCTTTAGCAAAGGATCCAAAGAATCGGCCTGCTTATCATATTCGTTTTCTAGAGCACGTAAGTTGTAGATTAGATAGCGATGGTGATCAAGAAATTTCAAGTAATATTTCTACTTCTGGGTCCTTTGGGGAAGCAGCTGATGAAAGAGTTCCGCCACCACACAAGAGAGAATTATACAATAAATTTGAGCCATGTTTCAGGCTTGAAGATTTGAATTTGGATGTTAAAAAGAAGGGGGAGGAAACGAGTGACAGATATCTTACTGAGAAGCAAGAAAACTCATATGTTTTTATTCACGAAATTATATTTTCTACTGTCGACAAACCAAAGCTTCTAAGCCAGCTTTCTTCATTGCTTTCTGATATAGGACTTAACATTCGCGAAGCGCATGTATTCTCGACAAATGATGGCTATTCCTTGGACGTTTTTGTGGTCGATGGATGGCCTATTGAGGATACAGATGGTTTATATGACGCCATGCAAAAAGCAATTGCTAGAAGCGAGGGTTCATGGTCTGGTTCGTCTAGTTGTCATTCATACTTGGAGAAAGCACTGGCATCCCTACCAAAATCTTTGGGTTGGGAAATAGACAGAAGATTATTAAAGATTGGTGAACGAATTGCATCTGGATCTTGTGGAGACTTGCATCGAGGAATATACCTTGGTCAAGATGTAGCTGTTAAAATTCTTAGATCTGAGCATTTAAATGATGCTCTGGAAGATGAATTTGCTCAAGAAGTGGCAATTCTGAGAGAGGTCCAGCATAAAAATGTTGTTGGTTTCATCGGGGCGTGTACAAAGTCTCCTCATTTGTGCATAGTAACAGAATATATGCCAGGAGGGAGCCTTTACGATTATTTGCATAAGAATCATAATGTCTTAAAGCTCTCTCAACTATTAAAATTTGCTATCGATGTCTGCCAAGGAATGGAGTACTTGCATCTAAACAACATTATTCATAGAGATTTAAAGACTGCAAATTTACTAATGGACACTCAAAATATTGTTAAGGTTGCTGATTTTGGGGTTGCGCGATTCCAAAACCAAGAGGGAGTGATGACTGCTGAAACAGGAACTTATAGATGGATGGCGCCTGAGGTTATAAACCACCAGCCTTATGATCAGAAGGCAGATGTTTTCAGTTTTGCTATCGTAATGTGGGAACTAGTGACAGCAAAGATTCCTTATGATTCCATGACTCCTCTACAAGCTGCTCTTGGAGTGAGACAGGGATTACGTCCAGATCTTCCCAAAAATGCACACCCCAAACTGTTGGAACTAATGCAGAGATGTTGGGATGATGTTCCTGAAAATCGGCCTTCCTTCACCGAGATAAAAGCTGAACTTCAAAATATTCTCCAAGTTCAGGTAGCTTTGATTTCTTCTTTTTTTGTTCCTTTTTTTTTTTTTAATTTTCTTCCAATTCTTGTTCTCTTTGGAAATTTCCCTTTCCCTTCCATGCTTGATTCTTAG 1725 40.75 SKEMDLIEGVGESSSPPRSFGGFSNHDVRLDVYNRLVESRHEDAVCNPEFREQLDAHFHRLPPSYGLDVNMDRVEDVLLHQKLLALAKDPKNRPAYHIRFLEHVSCRLDSDGDQEISSNISTSGSFGEAADERVPPPHKRELYNKFEPCFRLEDLNLDVKKKGEETSDRYLTEKQENSYVFIHEIIFSTVDKPKLLSQLSSLLSDIGLNIREAHVFSTNDGYSLDVFVVDGWPIEDTDGLYDAMQKAIARSEGSWSGSSSCHSYLEKALASLPKSLGWEIDRRLLKIGERIASGSCGDLHRGIYLGQDVAVKILRSEHLNDALEDEFAQEVAILREVQHKNVVGFIGACTKSPHLCIVTEYMPGGSLYDYLHKNHNVLKLSQLLKFAIDVCQGMEYLHLNNIIHRDLKTANLLMDTQNIVKVADFGVARFQNQEGVMTAETGTYRWMAPEVINHQPYDQKADVFSFAIVMWELVTAKIPYDSMTPLQAALGVRQGLRPDLPKNAHPKLLELMQRCWDDVPENRPSFTEIKAELQNILQVQVALISSFFVPFFFFNFLPILVLFGNFPFPSMLDS 574
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 8108313 8119741 + Bma001084.1 Bma01g00863 75380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00863 574 Gene3D Transferase(Phosphotransferase) domain 1 363 547 - -
Bma01g00863 574 CDD STKc_MAP3K-like 291 533 - -
Bma01g00863 574 SMART serkin_6 285 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g00863 574 SUPERFAMILY ACT-like 183 250 IPR045865 -
Bma01g00863 574 Pfam Protein tyrosine and serine/threonine kinase 285 533 IPR001245 GO:0004672|GO:0006468
Bma01g00863 574 PRINTS Tyrosine kinase catalytic domain signature 396 414 IPR001245 GO:0004672|GO:0006468
Bma01g00863 574 PRINTS Tyrosine kinase catalytic domain signature 442 452 IPR001245 GO:0004672|GO:0006468
Bma01g00863 574 PRINTS Tyrosine kinase catalytic domain signature 461 483 IPR001245 GO:0004672|GO:0006468
Bma01g00863 574 PRINTS Tyrosine kinase catalytic domain signature 504 526 IPR001245 GO:0004672|GO:0006468
Bma01g00863 574 PRINTS Tyrosine kinase catalytic domain signature 359 372 IPR001245 GO:0004672|GO:0006468
Bma01g00863 574 SUPERFAMILY Protein kinase-like (PK-like) 278 561 IPR011009 -
Bma01g00863 574 ProSitePatterns Serine/Threonine protein kinases active-site signature. 402 414 IPR008271 GO:0004672|GO:0006468
Bma01g00863 574 MobiDBLite consensus disorder prediction 1 21 - -
Bma01g00863 574 Gene3D Phosphorylase Kinase; domain 1 275 362 - -
Bma01g00863 574 ProSiteProfiles Protein kinase domain profile. 285 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g00863 574 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 13 539 - -
Bma01g00863 574 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 13 539 - -
Bma01g00863 574 ProSiteProfiles ACT domain profile. 184 258 IPR002912 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g00863 Bma02g00273 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00863 Bma-Chr1:8108313 Bma02g00265 Bma-Chr2:2816445 0 dispersed
Bma01g00863 Bma-Chr1:8108313 Bma01g00872 Bma-Chr1:8184087 0 proximal
Bma01g00863 Bma-Chr1:8108313 Bma02g00273 Bma-Chr2:3146587 0 wgd
Bma01g00863 Bma-Chr1:8108313 Bma02g00263 Bma-Chr2:2773467 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66265 PF07714 PK_Tyr_Ser-Thr 7.20E-74 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00863 - - zju:107403422 840.106