Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00867 ATGCCGTCGGTTCATTTTCTGCTATTTTGGGTGAGCTTCTTCTTCTTCTTTAACCTAATCTTTCTCTCTCTTTCTTCCCCTTTCTTCCCTGTTTCTAATGTCACTCTCTATGGCGACGCGTCTTTCACAAGAAACTCCATTTTTCTCACTCAAACTCCCTCCTGCTTCTCTTCAACTTCCCCTCCGACTTCCCCTATTTCTCGGCCTTCCGGCGTCGGAAGAGCTTTCCACGTCAACGCAATTCGCTTTCTCGATTGGGCAAACAACTCCTCTGCATCTTTCATCTCCCATTTTTCCTTCTCCATAGTTCGAAAGTCGTTTTGCCCTTCCGGCGACGGGATTGTGTTTCTCATCACTTCTAATGTGAGTTCCTTCAGTCTTTCCCATGGCTACATGGGTCTTCCCGAACCAGCCCTAAACTCTGAAGACACTTTCTTCGCTGTAGAGTTCGATACTAATTTTAATCCTTCTCTCGGAGACATTAATGGAAATCATATCGGCATTGATGTTAATTCTGTTACTTCTTTATCCTCAGTTGATTTAATTTCGAAAGGAATCGATTTGAAGAGTGGAAACTCTGTGAATGCTTGGGTTGAATACAGACACGACATGAAAATGGTCCGGGTTTTTGTTGGGTTGTCACAGATTAGGCCGCCGAATCCTCTTCTTGTTGCTCAGATCGATCTTTCGCAGCATTTCAAGGAGGCAATGCATGTCGGATTCTCTGCTTCGAATGGACAGGGCTCTGCGCTTCACATCATTCACCAATGGTGGTTCAAAACTTTTGAAATTCCGCCTTCTGGGATTCTTCTAGACGATGAAGAAGGAGACTGTTTTATGTGTGTTTCCTCGGAGGATTCAAGCTTTAACTATGGAGGTTCTGCTTCTAGCCAAAGAAAAATTAGAGCAAAAGAAATGGCGCTCGGACTCGGAGGATTAACTGCGTTTTCATGCTCTGTTTTCGCCATTCTCGTCGTAATTGTAGTTTTCTTGCTAAAAAGAAGAAAACAAATAATCAGGAGAAACACCAGAGAAACCCTGGCTTGTGAGTTTCAGACGAACAAAGTTCCATCAAGATTAACACTCGCAGAGATAAGAACAGCGACAATGGGGTTTAATCGAAGCAGAATCGTTGGAGAAGGAGGATCGGCAACAGTTTACAAAGGATCTCTGCAAAATGGGCGAGAGGTTGCTGTTAAAAGGTTTGAAAGAACCAGTTCCAACTCTAATGATCGAATTCGTAATCCCTTTTCCACCGAGTTTTCAACTATGGCCGATTGTTTACGACACAAAAACTTGGTTCAACTCCATGGATGGTGCTGCGAAGGATCAGAGCTTGTTCTGGTTTACGAGTATTTACCGAACGGAAGCCTCGACAAAATTCTCCACAGAAACTCCGATCCTCAATTCGTATTATCATGGAAACAGCGACTCAAAATTGTTCTTGGCGTTGCCTCTGCTCTTACTTATCTTCATGAACAATGCGAGAGCCAAGTGATTCACAGAGATGTAAAGACCTGCAATATAATGCTCGACGAAGAGTTTAATCCAAAGCTTGGTGATTTTGGTTTGGCAGAAGTTTACCAGCACAGCTCGATCGACAGAGAAGCGACGGTCCCCGCAGGAACAATCGGCTATCTTGCACCGGAGTACGTATTTTCCGGCATTCCAAGTGTTAAAACCGACGTTTACAGCTTCGGAGTGGTGGTTCTGGAGGTGGCCTCGGGGAGGAAGCCGGTGGAAGACGACGGTACGGTGCTGGTCGATCAAATTTGGAAGCTATGGGAAAGGGGGAGGCTAATGGAGGGCGCTGATCCAAAGTTGAAGAAGAAGTACGATGCGATGGAAATGGAAAGAATGTTAATTGTGGGGCTTAGTTGCGTAAATCCAAACCATGAAAAGCGGCCGACGATGAAGGAAGCTGCGAAGATTTTACGGTGCGAATCTCCGCTTCCTGTGTTGCCGTCGAGGAAGCCGAGGATGAGAATCCGATCAGTTGACGCTGACGATCGTCTTGAAGAATCCGGTGAGCGCCCGAGCCTAGATGATGCGCAGTGGATGACTCCGAGGAGCCATTTTAGCCAGAAGTAA 2091 45.62 MPSVHFLLFWVSFFFFFNLIFLSLSSPFFPVSNVTLYGDASFTRNSIFLTQTPSCFSSTSPPTSPISRPSGVGRAFHVNAIRFLDWANNSSASFISHFSFSIVRKSFCPSGDGIVFLITSNVSSFSLSHGYMGLPEPALNSEDTFFAVEFDTNFNPSLGDINGNHIGIDVNSVTSLSSVDLISKGIDLKSGNSVNAWVEYRHDMKMVRVFVGLSQIRPPNPLLVAQIDLSQHFKEAMHVGFSASNGQGSALHIIHQWWFKTFEIPPSGILLDDEEGDCFMCVSSEDSSFNYGGSASSQRKIRAKEMALGLGGLTAFSCSVFAILVVIVVFLLKRRKQIIRRNTRETLACEFQTNKVPSRLTLAEIRTATMGFNRSRIVGEGGSATVYKGSLQNGREVAVKRFERTSSNSNDRIRNPFSTEFSTMADCLRHKNLVQLHGWCCEGSELVLVYEYLPNGSLDKILHRNSDPQFVLSWKQRLKIVLGVASALTYLHEQCESQVIHRDVKTCNIMLDEEFNPKLGDFGLAEVYQHSSIDREATVPAGTIGYLAPEYVFSGIPSVKTDVYSFGVVVLEVASGRKPVEDDGTVLVDQIWKLWERGRLMEGADPKLKKKYDAMEMERMLIVGLSCVNPNHEKRPTMKEAAKILRCESPLPVLPSRKPRMRIRSVDADDRLEESGERPSLDDAQWMTPRSHFSQK 696
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 8137422 8139512 + Bma001088.1 Bma01g00867 75384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00867 696 ProSitePatterns Serine/Threonine protein kinases active-site signature. 499 511 IPR008271 GO:0004672|GO:0006468
Bma01g00867 696 CDD lectin_legume_LecRK_Arcelin_ConA 22 262 IPR001220 GO:0030246
Bma01g00867 696 Gene3D Phosphorylase Kinase; domain 1 333 452 - -
Bma01g00867 696 PANTHER - 26 670 - -
Bma01g00867 696 Gene3D - 21 267 - -
Bma01g00867 696 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.1 26 670 - -
Bma01g00867 696 Pfam Legume lectin domain 31 263 IPR001220 GO:0030246
Bma01g00867 696 MobiDBLite consensus disorder prediction 658 696 - -
Bma01g00867 696 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 263 IPR013320 -
Bma01g00867 696 SUPERFAMILY Protein kinase-like (PK-like) 352 645 IPR011009 -
Bma01g00867 696 SMART serkin_6 372 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g00867 696 CDD STKc_IRAK 378 645 - -
Bma01g00867 696 Pfam Protein kinase domain 373 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g00867 696 ProSitePatterns Protein kinases ATP-binding region signature. 378 400 IPR017441 GO:0005524
Bma01g00867 696 ProSiteProfiles Protein kinase domain profile. 372 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g00867 696 MobiDBLite consensus disorder prediction 660 680 - -
Bma01g00867 696 Gene3D Transferase(Phosphotransferase) domain 1 453 650 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00867 Bma-Chr1:8137422 Bma13g01119 Bma-Chr13:44301359 1.60E-143 dispersed
Bma01g00867 Bma-Chr1:8137422 Bma10g00593 Bma-Chr10:7271495 3.92E-144 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66266 PF00069 Pkinase 6.40E-46 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00867 - - zju:107421685 849.736