Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00910 ATGGTGAAAACTATGTGGGTTCTCATTGTCTTCCTTCTTTTCAGCTCGGCATTTGCTGCTTCCCAGAACAATGTCACTGATAACCCAGCTGATGAGTTGGTGGCGGTTCTCAATTCCAACCGAACTGCCCAAAATTTGTCGTATCTACACGACAATCCGGGCCTCGGATGCATCGCTCTGCAGTACATCAAAGCATACCAGGGCAATTGTAAAGCCGTGGGAGGCCTCGATGCCATGAAACCGGTTTTGGCTTCTCCAGAGAAGGTGTTTCATAGGGACGCAGATGAGGAGGACCATGGCGGAGTGGACGACATGACGAAGTTGACGTATTTGAATGAGCCTGGCGTGCTTTATAACCTTCACAGGAGATATTCTCTCAATGACATATATACGTACACCGGTAGCATTTTGATTGCTGTTAATCCATTCACGAAGCTTCCGCATCTGTACAATATACATATGATGGAGCAGTACAAGGGTGCTCCTTTTGGCGAACTTAGTCCTCATGTTTTTGCTGTTTCTGATGCTTCATATAGGTCAATGATCTGCGAGGGCCGAAATCAGTCCATATTAGTCAGTGGAGAAAGTGGGGCTGGGAAAACTGAGACAACAAAATTAATAATGCAGTATCTCACATTTGTAGGTGGTCGTGCCTCTGGTGATGATAGGACAGTTGAGCAACAAGTTCTCGAATCAAATCCACTCCTAGAGGCATTTGGGAATGCAAGGACTGTCAGAAACGATAACTCAAGTCGTTTTGGAAAATTTGTAGAGATTCAGTTTGATGCTAGTGGTAGAATATCTGGCGCTGCAATTAGAACTTACCTTTTGGAGAGATCTCGCGTGGTCCAAATAACTGATCCTGAGAGGAACTATCACTGCTTTTACCAGTTGTGTGCATCCGAAAGGGATGCAAAGAAGTATAAGTTAGATCAACCAAGTAAATTCCACTATTTAAATCAAAGCAAAACCTATGAACTTGATGGGGTTAACAGTGCTGTGGAATACATGAAAACCCGGAGGGCAATGGATATAGTTGGAATAACTCATGAGGACCAGGAAGCTATCTTTCAAACCTTGGCTGCAATATTGCATCTTGGCAACATTGAATTTTCTCCTGGACATGTATTCAAGATGGAGCAGGAGGAGTATAGCAAAGAAGAAATAAACTGGAGCTACATTGAATTTATAGACAATCAGGATGTTCTTGATTTGATCGAGAAGAAACCTATTGGGATAATTTCTTTGCTTGATGAAGCTTGCCTGTTCCCAAGATCGACCCATGCAACGTTTTCAACCAAATTATTTCAGAACTTTCGCGGCCATTCAAGATTGGAAAAGGCAAAATTTTCAGAAACAGATTTTACGGTTTCCCATTATGCTGGAAAGGTTACTTATCATTCAGATTCATTCTTGGATAAAAATCGGGATTACATTGTAGTAGACCATTGCAATTTATTGTCTTCTTCCAAAAGCACTTTTGTTGCTGGTCTTTTCCCTTCACTTCAAGAAGAATCTTCAAGGTCCTCATACAAGTTTTCTTCTGTGGCCTCTAGATTTAGGCAACAACTTCAAGCACTCATGGAGACCCTGAACTCAACAGAACCTCATTATATACGGTGTGTGAAGCCCAATTCTCTTAATCGGCCTCAAAAATTTGAGAATCAGAGTATTCTACACCAGTTACGCTGTGGGGGTGTTTTAGAAGCTGTACGGATAAGTCTGGCGGGTTATCCCACTAGAAGAACGTATTCAGAGTTTGTAGATCGTTTTGGATTGTTGGCTCCTGAACTCATGGATGGAAGTTATGATGAAAAAGCTACAACAGAGAAGATTTTACAAAAGTTGAAACTTAGGAACTTTCAGTTGGGCAGGACCAAAGTGTTTCTTAGAGCTGGTCAAATTGGCATTCTAGATGCTCGACGGTCGGAAGTATTGGATAATTCTGCTAAGTGCATCCAACGTAGACTGCGAACATATTATGCACGCAAGGATTTTATATTGATTCGCTGTACTGCAGTGGAACTCCAAGCATACTGCAGAGGATATCTTACTCGAAGGATGTATACAGTAAAGCGAGAAACCAATGCTGCTGTATTAATACAAAGAAATGTTCGCAAGTGGCTTATACAAAGTGCTTACATGACAATTCGTTTTGCGGCTTCAGTTATCCAGTCTAATATTCGTGGTTTCTTAAATCGCCAAAAAATTTTGCATCAAAAGGAACATAAAGCGGCTACATTGATTCAGGCTCAATGGAGAACATGCAAGGTTCGTACTGTTTTCCGCCGTGACCAAGCTTCCGTGGTTGCCATTCAGTGCCGTTGGCGGCAAAAGATGGCAAAAAGAGAACTTCGAAGGCTTAAGCAAGAAGCCAATGAAGCCGGGGCATTGCGTTTGGCAAAGAATAAACTTGAGAAGCAAATAGAAGAGCTCACATGGCGGTTACATCTGGAAAAACGATTGCGGGTTTCCAATGAAGAGGCCAAGTCAATAGAAATTTCAAAACTTCAAAAGATGTTGGTCTCTCTTAACATGGAGTTAGATGCAGCTAAATTAGCAACAATTAACGAGTGCAACAAAAATGCGGTGTTGCAGAATCAATTGGAATTGTCGGCAAAAGAAAAGTCTGCTTTGGAAAGAGAAATTATAGCAATGGCGGAGTTGAGAAGGGAAAATGCGTTGCTTAGGAGTTCGTTGAAAGCCCTGGAGAAAAAAGATTCAGCTCTGGAGATTGAGCTAATGAAGTATCAAAGAGATAGCAACGAAACAATTGAGAAGCTGAAGGAAGTTGAACAAAAGTGTTCTCAGCTTCAGCAAACTGTGAAAAGTTTGGAGGAAAAACTCTTACTTCTAGAGAATGATAATCATGTCCTGCGACAAAAAGCATTAAGTGCTACTCCCAAGAGCATCCGTCCTGGTATTGTTAAGTCATTAGCAGAGAAATCATTCGGTGCTCAAGTTATTACTCCGCAAACTGATCGGAAATCTTTATTTGAGTCACCAACGCCAACAAAACCTACGGTACCCTATGCTCATGGCCTAACAGATTCTCGTCGATCAAAGCTGATGATTGAGAGGCGTCAGGAAAACCACGAATTCCTCTCTAGGTGCATCAAAGAAGATATGGGCTTCAAAGGTGGTAAACCACTTGCTGCATGCGTCATGTACAAATGCCTTCTTCATTGGCATGCTTTTGAATCTGAAAGAACAGTTATTTTTGACTTCATAATTGAAGGAATTAATGAAGCTCTTAAGGTTGGGGATGAAAGAATTACATTGCCATATTGGTTGTCCAATGCATCTGCTCTGCTATGCCTTCTGCAGAGAAATTTACGGTCAAATGGATTTCTTAATACATCCGCTCAGCGTTCTACTGGGTTATCAACCAGAATTGCGCAAGGCCAAAAATCACCTTTCAAACATTTGGGATTTGAAGATGGGATATCTCATCTTGAAGCGAGATATCCTGCTATACTTTTCAAACAACAACTCACTGCTTGTGTGGAAAAGATATTTGGTTTGATTCGCGACAACTTGAAAAAGGAACTATCTCCACTCTTGGGCTTGTGCATTCAGGCACCAAAAACTACTCGAGTGCATTCTGGAAAATCCTCTAGATCGCCTGGTGGACCTCCTCTGCTGTCTCCGAGCAGCCAGTGGGATAACATTATCAATTTTTTGGATTCTCTGATGAGTCAATTATGCAAAAATCATGTGCCTTCCTTCTTCATCCGAAAATTAACTACTCAGGTGTTTTCTTTTATCAATATTTCGCTTTTCAATAGTCTTCTACTGCGACGTGAATGTTGTACATTTTCAAATGGAGAATATGTGAAATCTGGGCTAGCAGATCTGGAGAAGTGGATTGTCAATGCCAAAGAAGAGTATGCGGGGACATCATGGCACGAGCTAAATTATATTAGGCAAGCTGTTGGATTTCTGGTTATACATCAGAAGAGAAAAAAATCACTCGAAGAGATAAGACTGGATCTGTGTCCGGCACTGACTGTTAGACAAATTTATCGGATAAGTACAATGTACTGGGACGACAAATATGGCACCCAAAGCGTATCTAATGAGGCATGTTGCGTGGTTGCTCAAATGAGAGAGATTTTGAACAAGGATAATCAGAACTTGACGTCCAATTCCTTCTTGTTGGATGATGATCTGAGCATCCCATTCTCTACTGAAGACATAGATATGGCTATTCCTGCTATAAACGCATCTGACATCGACCTTCCTAATTTCGTATCAGAATATCCCTGCGTACAGTTTTTGGTTCAAAGCGTATGA 4296 41.39 MVKTMWVLIVFLLFSSAFAASQNNVTDNPADELVAVLNSNRTAQNLSYLHDNPGLGCIALQYIKAYQGNCKAVGGLDAMKPVLASPEKVFHRDADEEDHGGVDDMTKLTYLNEPGVLYNLHRRYSLNDIYTYTGSILIAVNPFTKLPHLYNIHMMEQYKGAPFGELSPHVFAVSDASYRSMICEGRNQSILVSGESGAGKTETTKLIMQYLTFVGGRASGDDRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDASGRISGAAIRTYLLERSRVVQITDPERNYHCFYQLCASERDAKKYKLDQPSKFHYLNQSKTYELDGVNSAVEYMKTRRAMDIVGITHEDQEAIFQTLAAILHLGNIEFSPGHVFKMEQEEYSKEEINWSYIEFIDNQDVLDLIEKKPIGIISLLDEACLFPRSTHATFSTKLFQNFRGHSRLEKAKFSETDFTVSHYAGKVTYHSDSFLDKNRDYIVVDHCNLLSSSKSTFVAGLFPSLQEESSRSSYKFSSVASRFRQQLQALMETLNSTEPHYIRCVKPNSLNRPQKFENQSILHQLRCGGVLEAVRISLAGYPTRRTYSEFVDRFGLLAPELMDGSYDEKATTEKILQKLKLRNFQLGRTKVFLRAGQIGILDARRSEVLDNSAKCIQRRLRTYYARKDFILIRCTAVELQAYCRGYLTRRMYTVKRETNAAVLIQRNVRKWLIQSAYMTIRFAASVIQSNIRGFLNRQKILHQKEHKAATLIQAQWRTCKVRTVFRRDQASVVAIQCRWRQKMAKRELRRLKQEANEAGALRLAKNKLEKQIEELTWRLHLEKRLRVSNEEAKSIEISKLQKMLVSLNMELDAAKLATINECNKNAVLQNQLELSAKEKSALEREIIAMAELRRENALLRSSLKALEKKDSALEIELMKYQRDSNETIEKLKEVEQKCSQLQQTVKSLEEKLLLLENDNHVLRQKALSATPKSIRPGIVKSLAEKSFGAQVITPQTDRKSLFESPTPTKPTVPYAHGLTDSRRSKLMIERRQENHEFLSRCIKEDMGFKGGKPLAACVMYKCLLHWHAFESERTVIFDFIIEGINEALKVGDERITLPYWLSNASALLCLLQRNLRSNGFLNTSAQRSTGLSTRIAQGQKSPFKHLGFEDGISHLEARYPAILFKQQLTACVEKIFGLIRDNLKKELSPLLGLCIQAPKTTRVHSGKSSRSPGGPPLLSPSSQWDNIINFLDSLMSQLCKNHVPSFFIRKLTTQVFSFINISLFNSLLLRRECCTFSNGEYVKSGLADLEKWIVNAKEEYAGTSWHELNYIRQAVGFLVIHQKRKKSLEEIRLDLCPALTVRQIYRISTMYWDDKYGTQSVSNEACCVVAQMREILNKDNQNLTSNSFLLDDDLSIPFSTEDIDMAIPAINASDIDLPNFVSEYPCVQFLVQSV 1431
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 8809128 8829806 - Bma001139.1 Bma01g00910 75427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00910 1431 Gene3D Kinesin motor domain 101 289 IPR036961 -
Bma01g00910 1431 Gene3D Kinesin motor domain 535 577 IPR036961 -
Bma01g00910 1431 Gene3D - 375 534 - -
Bma01g00910 1431 PRINTS Myosin heavy chain signature 130 149 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bma01g00910 1431 PRINTS Myosin heavy chain signature 187 212 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bma01g00910 1431 PRINTS Myosin heavy chain signature 234 261 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bma01g00910 1431 PANTHER PROTEIN OPAQUE1-LIKE 375 1428 - -
Bma01g00910 1431 PANTHER PROTEIN OPAQUE1-LIKE 82 374 - -
Bma01g00910 1431 Coils Coil 862 882 - -
Bma01g00910 1431 PANTHER MYOSIN 375 1428 - -
Bma01g00910 1431 PANTHER MYOSIN 82 374 - -
Bma01g00910 1431 SMART iq_5 741 763 IPR000048 GO:0005515
Bma01g00910 1431 SMART iq_5 645 667 IPR000048 GO:0005515
Bma01g00910 1431 SMART iq_5 716 738 IPR000048 GO:0005515
Bma01g00910 1431 SMART iq_5 764 786 IPR000048 GO:0005515
Bma01g00910 1431 SMART iq_5 668 690 IPR000048 GO:0005515
Bma01g00910 1431 SMART iq_5 693 715 IPR000048 GO:0005515
Bma01g00910 1431 Pfam Myosin head (motor domain) 375 631 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bma01g00910 1431 Pfam Myosin head (motor domain) 102 372 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bma01g00910 1431 CDD MyosinXI_CBD 1026 1398 IPR037975 GO:0007015
Bma01g00910 1431 SMART DIL_2 1247 1354 IPR002710 -
Bma01g00910 1431 SMART MYSc_2a 94 644 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bma01g00910 1431 Gene3D - 645 695 - -
Bma01g00910 1431 Gene3D - 696 742 - -
Bma01g00910 1431 Gene3D - 743 793 - -
Bma01g00910 1431 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 694 792 IPR027417 -
Bma01g00910 1431 ProSiteProfiles Dilute domain profile. 1075 1371 IPR002710 -
Bma01g00910 1431 Coils Coil 778 822 - -
Bma01g00910 1431 Gene3D - 290 344 - -
Bma01g00910 1431 Gene3D Myosin VI head, motor domain, U50 subdomain 345 372 - -
Bma01g00910 1431 Gene3D - 578 644 - -
Bma01g00910 1431 Coils Coil 834 854 - -
Bma01g00910 1431 Pfam IQ calmodulin-binding motif 720 736 IPR000048 GO:0005515
Bma01g00910 1431 Pfam IQ calmodulin-binding motif 673 687 IPR000048 GO:0005515
Bma01g00910 1431 Pfam IQ calmodulin-binding motif 743 763 IPR000048 GO:0005515
Bma01g00910 1431 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 94 691 IPR027417 -
Bma01g00910 1431 Coils Coil 886 962 - -
Bma01g00910 1431 ProSiteProfiles IQ motif profile. 717 746 IPR000048 GO:0005515
Bma01g00910 1431 ProSiteProfiles IQ motif profile. 669 698 IPR000048 GO:0005515
Bma01g00910 1431 ProSiteProfiles Myosin motor domain profile. 100 643 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bma01g00910 1431 ProSiteProfiles IQ motif profile. 765 794 IPR000048 GO:0005515
Bma01g00910 1431 Pfam DIL domain 1248 1351 IPR002710 -
Bma01g00910 1431 ProSiteProfiles IQ motif profile. 742 771 IPR000048 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g00910 Bma02g00549 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00910 Bma-Chr1:8809128 Bma07g00554 Bma-Chr7:7539438 4.24E-136 dispersed
Bma01g00910 Bma-Chr1:8809128 Bma02g00335 Bma-Chr2:4740102 0 wgd
Bma01g00910 Bma-Chr1:8809128 Bma02g00549 Bma-Chr2:11098431 2.02E-34 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00910 K10357 - zju:107420053 1673.29