Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00916 ATGGAGGAAATGTCTACGGCTGTTGCAGTGCCATTTAGAGTAGGTAACCAAGTCTTTGATAATCCAAATCTAGCTACACACATGGATATCACAAGGCTTAAGCTGATGACAGACACAGCCGGATTACTATCTGATTCTATGACTAATGGCCCCTCTGAGCTAGTTGAAAGAACTGATGAGGATTGTATCAGTAGTGATTTGGAGAATGAAGTGATTATGGAGATAGTTGAAGAGGAGCGAAGAGCATTTCCTTTATTGGGTATTAGATCTCAAAATACGAGCAACTGGGTCGCTGCAGGCGAGGTAGTAGTTCAAGAAAGCGAGGAAGATGATTCGTTGTCATTGGAGGGGGATCACAATCTCGACAGCTCTTGTTCGCTCTCTGTTGTGAGTGAAAATAGTAGCATATGTGGAGACGATTTCTTCGATTTTCAGACATCCTACGATGTTGAAACAAGTAGTTCCGCAGACATAGAGAAGAGGACTTGCGATGTTGATAATCAGGGAAAAGGCAACAATTTAGGTGGTTCAACTATTGGAAAAGTAACGGGGAGTGATCCTCTTTCTGCTGCAGTGAACCTTGAGGAAGATGTTCAAAATGTTCTTGAACCTGAGGTATCTAAATTGGTTTTTCGATTACCTCTTGTCGAAAAAGGAAGTAGCGAAATAGTCAGCCGTTGTGTTTTTGAAGTGGATTATGTCCCCCTTTGGGGGTCTACGTCGTTGTGCGGAAGAAGACCCGAAATGGAAGATGCCTTGGCTACTGTTCCTTGTTTCTTTGAAGTTCCTATTCAGATGCTTTCTGATGACTGGGCTGTGGATGGTCCGAAGAAGCACATATCTCATCAAAAGGTTCATTTTCTCGGAGTGTATGACGGCCATGGTGGTTTCCAGGTTGCTAACTACTGTCGGGAGCGACTTCACTTGGCTTTAGCCGAGGAGATTGAATTTGTCAAGGAAGGTTTATTAGCTGGAAGCATTACCGATAATTGCCAAGCTCAGTGGAAAAGAGCATTTACCAATTGTTTTCTTAAGGTTGATGCTGAAGTTGGAGGAAAATCTAGAACAGAGCCTGTGGCCTCGGAAACTGTCGGTTCAACTGCTGTCACTGCGATAATTTGTGCTTCTCATATTATAGTAGCTAATTGTGGAGATTCAAGGGCTGTGCTGTGTCGTGGGAAAGAGCCGAAGGCCTTGTCAGTGGATCATAAACCTAATAGAGAAGATGAATATGCAAGAATTGAGGCTGCCGGAGGAAAGGTCATTCAATGGAATGGGCACCGTGTTTTTGGTGTCCTTGCAATGTCAAGGTCTATCGGCGATAGATACTTGAAACCGTGGATCATTCCGGAGCCTGAAGTGATGTTTCTTCCTCGAGCTCGAGACGATGAATGTCTAATTCTCGCGAGTGATGGTTTGTGGGACGTAATGTCCAACGAAGAGGCATGTGACTTGGCTCGAAGACGAATTCTCATATGGCACAAAAAGAACGCCTCCCTTAATCTAACCCACGAAAGGGATGGAGGAATCGACCCTGCAGCCCAAGCGGCAGCCGACTATCTATGCAACCGAGCTCTTCAGAAGGGTAGTAAAGACAACATTACTGTGATCGTAGTGGACTTGAAAGCTCAGAGGAAGTTCAAGACAAAAACATGA 1656 44.5 MEEMSTAVAVPFRVGNQVFDNPNLATHMDITRLKLMTDTAGLLSDSMTNGPSELVERTDEDCISSDLENEVIMEIVEEERRAFPLLGIRSQNTSNWVAAGEVVVQESEEDDSLSLEGDHNLDSSCSLSVVSENSSICGDDFFDFQTSYDVETSSSADIEKRTCDVDNQGKGNNLGGSTIGKVTGSDPLSAAVNLEEDVQNVLEPEVSKLVFRLPLVEKGSSEIVSRCVFEVDYVPLWGSTSLCGRRPEMEDALATVPCFFEVPIQMLSDDWAVDGPKKHISHQKVHFLGVYDGHGGFQVANYCRERLHLALAEEIEFVKEGLLAGSITDNCQAQWKRAFTNCFLKVDAEVGGKSRTEPVASETVGSTAVTAIICASHIIVANCGDSRAVLCRGKEPKALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRARDDECLILASDGLWDVMSNEEACDLARRRILIWHKKNASLNLTHERDGGIDPAAQAAADYLCNRALQKGSKDNITVIVVDLKAQRKFKTKT 551
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 8903840 8906275 - Bma001145.1 Bma01g00916 75433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00916 551 CDD PP2Cc 238 541 IPR001932 -
Bma01g00916 551 Gene3D - 223 551 IPR036457 -
Bma01g00916 551 PANTHER ALPHABET, ISOFORM E-RELATED 119 551 - -
Bma01g00916 551 ProSiteProfiles PPM-type phosphatase domain profile. 236 541 IPR001932 -
Bma01g00916 551 SUPERFAMILY PP2C-like 230 542 IPR036457 -
Bma01g00916 551 SMART PP2C_4 228 539 IPR001932 -
Bma01g00916 551 Pfam Protein phosphatase 2C 279 534 IPR001932 -
Bma01g00916 551 ProSitePatterns PPM-type phosphatase domain signature. 287 295 IPR000222 GO:0043169
Bma01g00916 551 PANTHER PROTEIN PHOSPHATASE 2C 6-RELATED 119 551 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g00916 Bma02g00536 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00916 Bma-Chr1:8903840 Bma07g00517 Bma-Chr7:6448042 5.68E-86 dispersed
Bma11g00104 Bma-Chr11:1042831 Bma01g00916 Bma-Chr1:8903840 1.51E-74 dispersed
Bma04g00120 Bma-Chr4:963819 Bma01g00916 Bma-Chr1:8903840 2.64E-81 transposed
Bma15g00328 Bma-Chr15:3199290 Bma01g00916 Bma-Chr1:8903840 8.91E-166 transposed
Bma01g00916 Bma-Chr1:8903840 Bma02g00345 Bma-Chr2:5551512 0 wgd
Bma01g00916 Bma-Chr1:8903840 Bma02g00536 Bma-Chr2:10564858 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00916 K14497 - zju:107420119 731.095