Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00924 ATGACTACCTCCACTTGTGGAGGCTCAGACTTGGAACTCTGCCGCGATGACTCCGCTGCTTTCACTCTCAAAGTCATAGCCATGGCTTCCATCCTCATTGCCGGTGTTGCCGGGATAGCCATTCCGCTCGGTGGAAGACACCGAAATTTCCTTAAGGCAGACAGTAATCTCTTCGTCGCTGCAAAAGCCTTTGCTGCTGGTGTGATCCTCTCGACTGGATTCGTCCACATGCTCTCTGGTGGGTCGGAGGCTCTGTCCAGTCCTTGTTTGCCCGCATTTCCTTGGTCCAAGTTTCCATTTCCTGGGTTCTTTGCCATGATTGCAGCTCTTGTGACCCTTTTGGTTGATTTTGTCGGGACTCAGTATTACGAGAGAAAGCAGGGGTTGAATCGTTCATACGAGGAGCAGAGTCAGGTTGGAGCATTAGAGGGAGGGCTTCAACAGGAAATTGTTCCAGCCATGGAGGTTAAGGAATGCAATGAGAAAGTGTTTGGGGAAGAAGAAGGTGGTGGAATGCATATTGTTGGAATGCATGCTCATGCAGCACATCATCGACATAGCCATCCGCACGGGAAAGAGGCTTGCGATGGGAACTTGCGAATGCAACGTTCTCATAATCATGATCATGGACATGGACATTCTCATGGGATTCGAAACAGCGATGAGGAGAGCAATGTTCGACATGTTGTGGTTTCTCAGATTTTGGAACTTGGGATTGTATCACATTCCGTGATCATCGGCCTATCTCTTGGAGTTTCTCAAAGTCCATGCACCATAAGACCGCTAATAGCAGCACTATCCTTCCACCAGTTCTTCGAAGGATTTGCGCTGGGAGGATGCATCTCCCAAGCGCAATTCAACCCGAAATCAGCCATGATCATGGCCTGCTTTTTTGCCATCACTACTCCGATCGGGATTGGAGCGGGGACCACCGTGGCATCCTTCTACAATCCTCTGAGCTCAGGAGCTTTGGTTGCGGAAGGGATATTGGACTCTCTTTCTGCTGGGATTCTGGTTTACATGGCCTTGGTGGATCTCATTGCAGCTGATTTTCTGAGCAAGAGAATGAGCTGCAATTTTAGGCTGCAAGTCGTGTCTTATTTCATGCTTTTCCTTGGGGCTGGATTGATGTCTCTGTTGGCTATTTGGGCT 1152 49.22 MTTSTCGGSDLELCRDDSAAFTLKVIAMASILIAGVAGIAIPLGGRHRNFLKADSNLFVAAKAFAAGVILSTGFVHMLSGGSEALSSPCLPAFPWSKFPFPGFFAMIAALVTLLVDFVGTQYYERKQGLNRSYEEQSQVGALEGGLQQEIVPAMEVKECNEKVFGEEEGGGMHIVGMHAHAAHHRHSHPHGKEACDGNLRMQRSHNHDHGHGHSHGIRNSDEESNVRHVVVSQILELGIVSHSVIIGLSLGVSQSPCTIRPLIAALSFHQFFEGFALGGCISQAQFNPKSAMIMACFFAITTPIGIGAGTTVASFYNPLSSGALVAEGILDSLSAGILVYMALVDLIAADFLSKRMSCNFRLQVVSYFMLFLGAGLMSLLAIWA 384
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 9022119 9023386 + Bma030213 Bma01g00924 75441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00924 384 PANTHER ZIP ZINC/IRON TRANSPORT FAMILY PROTEIN 1 384 - -
Bma01g00924 384 PANTHER ZINC/IRON TRANSPORTER 1 384 - -
Bma01g00924 384 TIGRFAM zip: ZIP zinc/iron transport family 8 384 IPR004698 GO:0005385|GO:0016021|GO:0071577
Bma01g00924 384 MobiDBLite consensus disorder prediction 189 205 - -
Bma01g00924 384 MobiDBLite consensus disorder prediction 187 223 - -
Bma01g00924 384 Pfam ZIP Zinc transporter 21 381 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00924 Bma-Chr1:9022119 Bma14g00204 Bma-Chr14:2536930 6.94E-94 dispersed
Bma01g00139 Bma-Chr1:1340926 Bma01g00924 Bma-Chr1:9022119 1.76E-90 transposed
Bma01g01684 Bma-Chr1:49007575 Bma01g00924 Bma-Chr1:9022119 9.03E-73 transposed
Bma03g00491 Bma-Chr3:3863205 Bma01g00924 Bma-Chr1:9022119 1.13E-23 transposed
Bma07g01251 Bma-Chr7:47484975 Bma01g00924 Bma-Chr1:9022119 9.30E-06 transposed
Bma07g01577 Bma-Chr7:51104831 Bma01g00924 Bma-Chr1:9022119 5.56E-20 transposed
Bma01g00924 Bma-Chr1:9022119 Bma02g00354 Bma-Chr2:5676755 0 wgd
Bma01g00924 Bma-Chr1:9022119 Bma02g00525 Bma-Chr2:10458428 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00924 K14709 - pvy:116142521 581.252