Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00975 ATGGAGGGTCCATCAGAGAAAAGATTTCCAGTGAATGCAAAAGATTATAAATTGTACGAAGAAGTTGGTGAAGGTGTCAGCGCCACTGTCTACAGGGCTATCTGCATGCCACTAAATGAGATTGTTGCTATTAAGGTTCTAGATTTGGAGAAGTGCAATAATGATCTGGATGGAATCCGGAGAGAGGTACAAACAATGACTTTGATTTCTCATACAAATGTATTACAAGCACATTGTTCTTTCACAAGTGGCCACAGCCTTTGGGTTGTGATGCCGTACATGGCTGGAGGATCATGTCTTCATATAATGAAATCTGCCTATCCAGAAGGTTTCGAAGAGCCTGTTATAGCTACTGTGTTGCGTGAAGTTCTCAAAGCTCTTGTTTACCTTCACGCCCATGGCCACATCCATAGGGATGTGAAGGCTGGGAATATATTAGTTGATTTTAATGGATCAATCAAGCTGGCTGACTTTGGAGTGTCAGCTTGTATGTTTGATACTGGAGACAGACTAAGATCAAGAAATACTTTTGTTGGGACCCCTTGTTGGATGGCTCCCGAAGTTATGCAGCAGTTGCATGGATATGATTTTAAGGCAGACATCTGGTCACTGGGAATAACAGCTCTTGAACTTGCTCATGGTCATGCCCCATTTTCCAAGTATCCGCCAATGAAAGTTTTGCTAATGACTTTGCAAAATGCTCCTCCTGGTCTTGACTACGAAAGAGACAAGAGATTTTCAAAGTCTTTCAAGGAGATGGTGGCTTTATGCTTAGTAAAGGATCCGAAGAAACGTCCAACTTCGGAGAAGCTTCTAAAACATCCTTTTTTCAAACAGGCACGCCAAAATGAATATATAGCTCGCACCATTCTTGACGGCCTTGTCCCTTTAGGGGATCGGTTTAAGATGCTGAAGGCAAAAGAGTCCGATCTTCTTCTGCAGAACAAAGCGATGTATGAAGATAAAGAGCAATTATCACAGCAAGAGTACATGCGAGGAATTAGTGCATGGAACTTCAACCTGGAAGATTTAAAAAGCCAGGCTGCCCTGATTCAGGATGTTGATATTACAGAGGTAGAAGATTCAGATGTGAGTAAGATGCAGAGGGAGAAGAATGATTCTTCGGGATTGCACGTAAAGAGGTCATTCATTGAGCAAATGAAACATTTAAACCCCACACCTAGTCAGGAGGATGAGTCTACCGAACTTCACGATTTGACATGTTCGCTTGCTTCAATGCCTGCTAAGCCTCTTGAAGCACTCAGAGGTTCTTTCGACTTTGGTGAGGATGATATAAAAGCAACTAGTCCACGAGCTTTGGATCAAGAAAATGGTTCTGAGGATGAGTGTTCTGGTCAAAATAGTTCATCGCGTTATGTTGAGCATAAAAGGAACTTTAGTGGCTCACTTCTTCCTGATAGAGCCATTTCTTCCAAAAAAGTTTCTGTTGATGGTTATAGGGATAATCCTCAATCAAAGTATTTATCAGAGCGGAACTATGGTGGTTCATTGTTGTATCGCCAGAAAAGAGACATGAATAGCCATTCATCTGCTGAAGATTTGTCAGAAGGAGCAATAGTGCAACATAAGGGCCGGTTTAAAGTCACTTCAGCAGATCTTAGTCCTAAGGGTCCAACTCCAACATCAGTATTGTTAAATGCAGGTTCTGGGGTTATTCCTACAATCCCGAACTTGACAGCTGCTGCAGTTTCTCCATCACTACAGAGCATTTTGCAGCAGCACACGTTGCAAAGGGAAGAAATAATAAAATTGATCAAGTATCTGGAACAAGTTTCTGGCAAGTATTCAGAGTCGGCTGAAGTGGCCACCAGTAGCCTTTCACAGATATCTTCGCCGTCCACACGAGAAAGAGTACTGAATTCTCAGCTCATCCACCTGCAACAGAGAGTTGATGTCCTTTCTGATGAATTAGAGAGACAGAAGTTGAAAAATGTCCAGTTAGAAAGAGAACTGAATGCTTTGGTTGCCAGCAAAGAGGAAAAATAA 2007 42.1 MEGPSEKRFPVNAKDYKLYEEVGEGVSATVYRAICMPLNEIVAIKVLDLEKCNNDLDGIRREVQTMTLISHTNVLQAHCSFTSGHSLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATVLREVLKALVYLHAHGHIHRDVKAGNILVDFNGSIKLADFGVSACMFDTGDRLRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSLGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEMVALCLVKDPKKRPTSEKLLKHPFFKQARQNEYIARTILDGLVPLGDRFKMLKAKESDLLLQNKAMYEDKEQLSQQEYMRGISAWNFNLEDLKSQAALIQDVDITEVEDSDVSKMQREKNDSSGLHVKRSFIEQMKHLNPTPSQEDESTELHDLTCSLASMPAKPLEALRGSFDFGEDDIKATSPRALDQENGSEDECSGQNSSSRYVEHKRNFSGSLLPDRAISSKKVSVDGYRDNPQSKYLSERNYGGSLLYRQKRDMNSHSSAEDLSEGAIVQHKGRFKVTSADLSPKGPTPTSVLLNAGSGVIPTIPNLTAAAVSPSLQSILQQHTLQREEIIKLIKYLEQVSGKYSESAEVATSSLSQISSPSTRERVLNSQLIHLQQRVDVLSDELERQKLKNVQLERELNALVASKEEK 668
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 9607098 9615357 - Bma001199.1 Bma01g00975 75492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00975 668 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Bma01g00975 668 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 666 - -
Bma01g00975 668 Gene3D Transferase(Phosphotransferase) domain 1 97 329 - -
Bma01g00975 668 Pfam Protein kinase domain 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g00975 668 SMART serkin_6 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g00975 668 ProSiteProfiles Protein kinase domain profile. 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g00975 668 CDD STKc_OSR1_SPAK 14 277 - -
Bma01g00975 668 Gene3D Phosphorylase Kinase; domain 1 5 92 - -
Bma01g00975 668 Coils Coil 630 664 - -
Bma01g00975 668 MobiDBLite consensus disorder prediction 436 459 - -
Bma01g00975 668 SUPERFAMILY Protein kinase-like (PK-like) 13 324 IPR011009 -
Bma01g00975 668 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 666 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00975 Bma-Chr1:9607098 Bma10g00841 Bma-Chr10:15014080 0 dispersed
Bma01g00975 Bma-Chr1:9607098 Bma12g00255 Bma-Chr12:3305310 2.27E-177 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66272 PF00069 Pkinase 1.30E-58 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00975 K08835 - zju:107415302 955.666