Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma01g00983 | ATGAAGAAAAGTGAAAGTGGGGGTGGGTATGTGAGGGCAGATCAAATAGATCTGAAAAGCTTGGACGAGCAACTGCAGAGGCATTTGAACCGAGCATGGACCATGGAGAAGATAAAAAAAGAGGAAGACGAAGAAGGCGGAGCAAGGCCTACGGTCACTAGGCAAGAGTGGGAGATAGACCCATCTAAGCTAATTATCAAGGGCGTTATAGCTCGGGGAGCTTTTGGAACGGTTCATCGTGGAATTTATGACGGTCTTGATGTTGCTGTTAAGCTTCTTGATTGGGGGGAAGAGGGTCATAGGTCAGACGCTGAAATAGCTTCTCTTAGAGCGGCTTTTACCCAAGAAGTAGTTGTCTGGCACAAGCTTGAACATCCCAATGTGACCAAGTTCATTGGTGCAACAATGGGAAGTTCGGAGTTGCACATACAAACAGATAATGGCCAAATTGGGATGCCAAGCAATGTGTGTTGTGTTGTTGTCGAATACTGTCCGGGAGGTGCATTAAAAACTTACCTTATAAAGAACCATCGAAAAAAACTGGCCTTTAAAGTAGTAGTTCATCTTGCACTGGACCTGGCAAGAGGATTGAGTTATCTTCATTCAAAAAAGATTGTCCACAGAGACGTTAAAACAGAAAACATGCTACTCGACAAAACACGCACAGTAAAAATTGCAGACTTTGGTGTTGCTCGTGTCGAGGCGTCGAATCCTAACGACATGACTGGGGAAACGGGAACTCTGGGTTATATGGCCCCTGAGGTTCTGAATGGTAATCCATATAATAGGAAATGCGATGTGTACAGTTTTGGAATATGCTTGTGGGAGATATACTGCTGTGACATGCCTTATCCCGATCTCAGCTTCTCGGAAGTGACATCCGCTGTTGTCCGCCAGAATCTGAGACCCGAGATTCCCCGTTGTTGCCCAAGCTCTTTCGCAAATGTAATGAAGCAATGTTGGGATGCTAACCCAGATAAGCGGCCCGAGATGGACAAGGCAGTGGCAATGCTGGAAGCGATCGACACGACTAAAGGTGGAGGCATGATTCCTCATGATCAACAACAAGGCTGTTTATGTTTTCAACGGTATCGAGGGCCT | 1101 | 45.96 | MKKSESGGGYVRADQIDLKSLDEQLQRHLNRAWTMEKIKKEEDEEGGARPTVTRQEWEIDPSKLIIKGVIARGAFGTVHRGIYDGLDVAVKLLDWGEEGHRSDAEIASLRAAFTQEVVVWHKLEHPNVTKFIGATMGSSELHIQTDNGQIGMPSNVCCVVVEYCPGGALKTYLIKNHRKKLAFKVVVHLALDLARGLSYLHSKKIVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSFANVMKQCWDANPDKRPEMDKAVAMLEAIDTTKGGGMIPHDQQQGCLCFQRYRGP | 367 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 9679366 | 9682358 | + | Bma030225 | Bma01g00983 | 75500 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma01g00983 | 367 | PANTHER | DUAL-SPECIFICITY KINASE TKL-PL-4 FAMILY-RELATED | 1 | 361 | - | - | |
Bma01g00983 | 367 | ProSiteProfiles | Protein kinase domain profile. | 64 | 341 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma01g00983 | 367 | PIRSF | ILK | 21 | 348 | - | - | |
Bma01g00983 | 367 | Gene3D | Phosphorylase Kinase; domain 1 | 51 | 147 | - | - | |
Bma01g00983 | 367 | Gene3D | Transferase(Phosphotransferase) domain 1 | 164 | 356 | - | - | |
Bma01g00983 | 367 | Pfam | Protein tyrosine and serine/threonine kinase | 67 | 337 | IPR001245 | GO:0004672|GO:0006468 | |
Bma01g00983 | 367 | PRINTS | Tyrosine kinase catalytic domain signature | 161 | 174 | IPR001245 | GO:0004672|GO:0006468 | |
Bma01g00983 | 367 | PRINTS | Tyrosine kinase catalytic domain signature | 199 | 217 | IPR001245 | GO:0004672|GO:0006468 | |
Bma01g00983 | 367 | PRINTS | Tyrosine kinase catalytic domain signature | 265 | 287 | IPR001245 | GO:0004672|GO:0006468 | |
Bma01g00983 | 367 | PRINTS | Tyrosine kinase catalytic domain signature | 309 | 331 | IPR001245 | GO:0004672|GO:0006468 | |
Bma01g00983 | 367 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 1 | 361 | - | - | |
Bma01g00983 | 367 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 205 | 217 | IPR008271 | GO:0004672|GO:0006468 | |
Bma01g00983 | 367 | SUPERFAMILY | Protein kinase-like (PK-like) | 48 | 338 | IPR011009 | - | |
Bma01g00983 | 367 | CDD | STKc_MAP3K-like | 70 | 338 | - | - | |
Bma01g00983 | 367 | SMART | serkin_6 | 64 | 341 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g00983 | Bma-Chr1:9679366 | Bma06g01565 | Bma-Chr6:51936843 | 0 | dispersed | |
Bma05g01170 | Bma-Chr5:50740015 | Bma01g00983 | Bma-Chr1:9679366 | 4.49E-18 | transposed | |
Bma01g00983 | Bma-Chr1:9679366 | Bma12g01032 | Bma-Chr12:42403872 | 1.50E-86 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66273 | PF07714 | PK_Tyr_Ser-Thr | 2.90E-63 | CL0016 | Bma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma01g00983 | - | - | csv:101212631 | 680.633 |