Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00983 ATGAAGAAAAGTGAAAGTGGGGGTGGGTATGTGAGGGCAGATCAAATAGATCTGAAAAGCTTGGACGAGCAACTGCAGAGGCATTTGAACCGAGCATGGACCATGGAGAAGATAAAAAAAGAGGAAGACGAAGAAGGCGGAGCAAGGCCTACGGTCACTAGGCAAGAGTGGGAGATAGACCCATCTAAGCTAATTATCAAGGGCGTTATAGCTCGGGGAGCTTTTGGAACGGTTCATCGTGGAATTTATGACGGTCTTGATGTTGCTGTTAAGCTTCTTGATTGGGGGGAAGAGGGTCATAGGTCAGACGCTGAAATAGCTTCTCTTAGAGCGGCTTTTACCCAAGAAGTAGTTGTCTGGCACAAGCTTGAACATCCCAATGTGACCAAGTTCATTGGTGCAACAATGGGAAGTTCGGAGTTGCACATACAAACAGATAATGGCCAAATTGGGATGCCAAGCAATGTGTGTTGTGTTGTTGTCGAATACTGTCCGGGAGGTGCATTAAAAACTTACCTTATAAAGAACCATCGAAAAAAACTGGCCTTTAAAGTAGTAGTTCATCTTGCACTGGACCTGGCAAGAGGATTGAGTTATCTTCATTCAAAAAAGATTGTCCACAGAGACGTTAAAACAGAAAACATGCTACTCGACAAAACACGCACAGTAAAAATTGCAGACTTTGGTGTTGCTCGTGTCGAGGCGTCGAATCCTAACGACATGACTGGGGAAACGGGAACTCTGGGTTATATGGCCCCTGAGGTTCTGAATGGTAATCCATATAATAGGAAATGCGATGTGTACAGTTTTGGAATATGCTTGTGGGAGATATACTGCTGTGACATGCCTTATCCCGATCTCAGCTTCTCGGAAGTGACATCCGCTGTTGTCCGCCAGAATCTGAGACCCGAGATTCCCCGTTGTTGCCCAAGCTCTTTCGCAAATGTAATGAAGCAATGTTGGGATGCTAACCCAGATAAGCGGCCCGAGATGGACAAGGCAGTGGCAATGCTGGAAGCGATCGACACGACTAAAGGTGGAGGCATGATTCCTCATGATCAACAACAAGGCTGTTTATGTTTTCAACGGTATCGAGGGCCT 1101 45.96 MKKSESGGGYVRADQIDLKSLDEQLQRHLNRAWTMEKIKKEEDEEGGARPTVTRQEWEIDPSKLIIKGVIARGAFGTVHRGIYDGLDVAVKLLDWGEEGHRSDAEIASLRAAFTQEVVVWHKLEHPNVTKFIGATMGSSELHIQTDNGQIGMPSNVCCVVVEYCPGGALKTYLIKNHRKKLAFKVVVHLALDLARGLSYLHSKKIVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSFANVMKQCWDANPDKRPEMDKAVAMLEAIDTTKGGGMIPHDQQQGCLCFQRYRGP 367
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 9679366 9682358 + Bma030225 Bma01g00983 75500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00983 367 PANTHER DUAL-SPECIFICITY KINASE TKL-PL-4 FAMILY-RELATED 1 361 - -
Bma01g00983 367 ProSiteProfiles Protein kinase domain profile. 64 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g00983 367 PIRSF ILK 21 348 - -
Bma01g00983 367 Gene3D Phosphorylase Kinase; domain 1 51 147 - -
Bma01g00983 367 Gene3D Transferase(Phosphotransferase) domain 1 164 356 - -
Bma01g00983 367 Pfam Protein tyrosine and serine/threonine kinase 67 337 IPR001245 GO:0004672|GO:0006468
Bma01g00983 367 PRINTS Tyrosine kinase catalytic domain signature 161 174 IPR001245 GO:0004672|GO:0006468
Bma01g00983 367 PRINTS Tyrosine kinase catalytic domain signature 199 217 IPR001245 GO:0004672|GO:0006468
Bma01g00983 367 PRINTS Tyrosine kinase catalytic domain signature 265 287 IPR001245 GO:0004672|GO:0006468
Bma01g00983 367 PRINTS Tyrosine kinase catalytic domain signature 309 331 IPR001245 GO:0004672|GO:0006468
Bma01g00983 367 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 361 - -
Bma01g00983 367 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Bma01g00983 367 SUPERFAMILY Protein kinase-like (PK-like) 48 338 IPR011009 -
Bma01g00983 367 CDD STKc_MAP3K-like 70 338 - -
Bma01g00983 367 SMART serkin_6 64 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00983 Bma-Chr1:9679366 Bma06g01565 Bma-Chr6:51936843 0 dispersed
Bma05g01170 Bma-Chr5:50740015 Bma01g00983 Bma-Chr1:9679366 4.49E-18 transposed
Bma01g00983 Bma-Chr1:9679366 Bma12g01032 Bma-Chr12:42403872 1.50E-86 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66273 PF07714 PK_Tyr_Ser-Thr 2.90E-63 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00983 - - csv:101212631 680.633