Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g01054 ATGGAGTTTCTGTCCAGAAAGTCGCCGCCGACAATGGTGGCGATTGCGGTGGCTTTGTGTGTTTTAGGGATGATGGTGCCAGAAGTTTCAGGCACTCGGTGGACTGTAGGGAGTAACAGGGGCTGGACCACCGGTGTTAACTACACTATTTGGGCTCAAGATAAGCACTTCTACATTGGCGACTGGCTCTTCTTTGTTTACGACCGGAATCAAAATAACGTTCTAGAGGTGAACCAAACGGACTACGAGACCTGCAATTCCGATCACCCGATCCATAGCTGGACAACAGGTGCCGGAAGAGACGTCGTCCCGCTCAACGTGACGAGGCCCTACTATTTCATCAGCGGCAAAGGTTTCTGCTATGGAGGTATGAAGCTGGCTATTAATGTTGAGAATTTACCTCCTCCTCCAATCATCTTTGCCATTAAATGA 432 49.31 MEFLSRKSPPTMVAIAVALCVLGMMVPEVSGTRWTVGSNRGWTTGVNYTIWAQDKHFYIGDWLFFVYDRNQNNVLEVNQTDYETCNSDHPIHSWTTGAGRDVVPLNVTRPYYFISGKGFCYGGMKLAINVENLPPPPIIFAIK 143
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11063948 11064852 - Bma001292.1 Bma01g01054 75571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g01054 143 Gene3D - 31 133 IPR008972 -
Bma01g01054 143 Pfam Plastocyanin-like domain 42 124 IPR003245 GO:0009055
Bma01g01054 143 PANTHER BLUE COPPER PROTEIN 12 135 IPR039391 GO:0009055
Bma01g01054 143 PANTHER LAMIN-LIKE PROTEIN 12 135 - -
Bma01g01054 143 ProSiteProfiles Phytocyanin domain profile. 32 132 IPR003245 GO:0009055
Bma01g01054 143 SUPERFAMILY Cupredoxins 31 130 IPR008972 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g01054 Bma02g00433 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01054 Bma-Chr1:11063948 Bma04g00446 Bma-Chr4:3668363 3.73E-17 dispersed
Bma01g02288 Bma-Chr1:80066624 Bma01g01054 Bma-Chr1:11063948 2.11E-08 transposed
Bma04g00798 Bma-Chr4:9105104 Bma01g01054 Bma-Chr1:11063948 3.69E-09 transposed
Bma13g00663 Bma-Chr13:16573221 Bma01g01054 Bma-Chr1:11063948 5.36E-36 transposed
Bma01g01054 Bma-Chr1:11063948 Bma02g00433 Bma-Chr2:6520297 1.39E-32 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g01054 - - pop:7496000 230.72