Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g01063 ATGTTCCTCAAGATTGCGCACTACAGAGCCGGAATCGTTCCGGTCCGGTTCCGGCGAGTTCCTTGTCACAAATCGGGAGGTGTAAAGTTTGAGATAAAAGGAAATCCTAATTGGAATCTGGTTTTGGTGTATAACGTGGGTGGATCGGGCGATGTTACGAGTGTTAAGATCAAGGGAGAGAAGACTGGTTGGATTCAAATGACGAGGAACTGGGGGATGAATTGGCAGTCCGGTGAGTATTTGATCGGGCAAAGCTTGTCGTTTCAAATGAGTACCAGTGATGGGAGGACGATCGAGGTTTATAATGTGGCGCCATCGAATTGGCAGTTTGGGCAGAGCTTTGAGGCAAGTAAAAATTTCTAG 363 47.11 MFLKIAHYRAGIVPVRFRRVPCHKSGGVKFEIKGNPNWNLVLVYNVGGSGDVTSVKIKGEKTGWIQMTRNWGMNWQSGEYLIGQSLSFQMSTSDGRTIEVYNVAPSNWQFGQSFEASKNF 120
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11133773 11134135 - Bma001302.1 Bma01g01063 75580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g01063 120 Gene3D - 26 120 IPR036749 -
Bma01g01063 120 PRINTS Expansin signature 102 118 IPR002963 GO:0009664
Bma01g01063 120 PRINTS Expansin signature 73 94 IPR002963 GO:0009664
Bma01g01063 120 PRINTS Expansin signature 26 38 IPR002963 GO:0009664
Bma01g01063 120 PRINTS Expansin signature 38 59 IPR002963 GO:0009664
Bma01g01063 120 PRINTS Expansin signature 2 15 IPR002963 GO:0009664
Bma01g01063 120 PANTHER EXPANSIN 1 120 - -
Bma01g01063 120 Pfam Expansin C-terminal domain 28 105 IPR007117 -
Bma01g01063 120 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 37 116 IPR007117 -
Bma01g01063 120 PANTHER EXPANSIN-A15 1 120 IPR002963 GO:0009664
Bma01g01063 120 PRINTS Expansin/Lol pI family signature 10 26 IPR007118 GO:0005576
Bma01g01063 120 PRINTS Expansin/Lol pI family signature 64 78 IPR007118 GO:0005576
Bma01g01063 120 PRINTS Expansin/Lol pI family signature 102 116 IPR007118 GO:0005576
Bma01g01063 120 SUPERFAMILY PHL pollen allergen 24 115 IPR036749 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01063 Bma-Chr1:11133773 Bma14g01168 Bma-Chr14:17053252 1.41E-58 dispersed
Bma01g01063 Bma-Chr1:11133773 Bma03g00200 Bma-Chr3:1535352 2.41E-54 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g01063 - - zju:107415875 190.66