Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g01086 GACGATGATGAGAGACCTAAGATGATTACAAGTACTACTGAAGAGATCTTTCCCTCAAAACAAGATCATCACATAAAAATTGACAAGCCTTCGTCGAGTTCAACACCATGGCTTCGATTGAAGGATCCGAGGATTGTGCGAGTTTCACGGGCGTTCGGAGGAAAGGATAGACATAGCAAAGTTTGTACAATAAGAGGATTAAGAGACAGAAGAGTGAGACTTTCTGTTCCTACTGCCATTCAACTGTATGATCTTCAACATAGGCTTGGCCTTAGTCAGCCTAGCAAGGTTGTGGATTGGCTGCTTCATGCAGCAAAAGACGAAATCGATGAACTTCCTCCGCTGCCGATTCAACCGGAATTCTTCGGACAGAATTACCAATCGATGCTCGAATTAGTCTCTCCGAAAGTTGCAAAAGAGGAAGAAAACGAGAGAGAAAATTGGAGGAGCTTTAAAAAACACAGCAATGGCAGTGAAAAACAGGTTTTCTTGGACAATCAATGTCTTCCAGGTACGTTGAATAACAATTCAAGCTCATTTGTTAGTCAATTGGAGGCCTCAGATCCTTCATCTTCTCATTTAGGCAGCCATCTCTCAACTCAATCAGAACATCATCTTCATAACTTCAATTTCATGCAATTGCCTCCCCCTTTTTCTCTGCCGACAGGGTCTCAAATCTTCATATGCCCTTCGGGTTCGCAATGGTATTTTCCGTCACCGCCGTTCGAGAGTGATCCGAGACAAGCGAACCATTTACAGACGATGAGCTCAACTTCCCAAAGTCTCTTTACGAACTCTCTTACACCCTCTCCATACCCTATTAGCCAATCTATCAGACCCTTCCCTTTCAGCATGGCTCCTAAGCTATTTACCTCTCCGGAGAACAGTGATGGTCGACCGAAATAA 906 43.82 DDDERPKMITSTTEEIFPSKQDHHIKIDKPSSSSTPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVPTAIQLYDLQHRLGLSQPSKVVDWLLHAAKDEIDELPPLPIQPEFFGQNYQSMLELVSPKVAKEEENERENWRSFKKHSNGSEKQVFLDNQCLPGTLNNNSSSFVSQLEASDPSSSHLGSHLSTQSEHHLHNFNFMQLPPPFSLPTGSQIFICPSGSQWYFPSPPFESDPRQANHLQTMSSTSQSLFTNSLTPSPYPISQSIRPFPFSMAPKLFTSPENSDGRPK 301
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11430176 11431204 + Bma001334.1 Bma01g01086 75603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g01086 301 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 8 149 IPR005333 GO:0003700
Bma01g01086 301 ProSiteProfiles TCP domain profile. 54 112 IPR017887 -
Bma01g01086 301 PANTHER TRANSCRIPTION FACTOR TCP2-LIKE 139 298 - -
Bma01g01086 301 Pfam TCP family transcription factor 54 157 IPR017887 -
Bma01g01086 301 PANTHER TRANSCRIPTION FACTOR TCP2-LIKE 8 149 - -
Bma01g01086 301 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 139 298 IPR005333 GO:0003700
Bma01g01086 301 MobiDBLite consensus disorder prediction 180 199 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01086 Bma-Chr1:11430176 Bma06g00019 Bma-Chr6:446399 4.79E-48 dispersed
Bma01g01086 Bma-Chr1:11430176 Bma01g01071 Bma-Chr1:11280842 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56702 PF03634 TCP 2.90E-26 No_clan Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g01086 - - rcu:8289049 271.552