Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma01g01095 | ATGGGTTCAGTTTGCTGCTGTATGAATGCTGACGAAATTGAAAATTTTGTGAACTCAAATGGATCTGTTCATAGGAATTGCGCATGTCTTGGTTGCTTCTTCCAAAACTTTTTAAATGTGTATACATCATTATTTCGAAGAGGAGAAATGCATGCTATTTCTTCATCAGTTCAAGGGGCAGCATCTATGGCTTCTGCAGCATCATATGACAACTCTATGCCCGATATGTATCATTCTCCTCCAAGGCCGTTGCCGTATGATGCTGACCCTAGATATATCCGCTTACAGAGAGATGGACTAGTTTCAAGGCGTGATAAGGGCTCAAGTCACCTTCATGAAGAATCAGAACCTCTGAGAAGTGATGTTGATAGGGCCGAAGAATCGTTAAGTGGAGTGGACAAATTGGATTCTGAAGATGAATCTAAAGAGCACATTTATAAATCCTCTCTGAAGATCTCTTCAGTAAAAGCTACAATTGGAGCTGAAAATGTTTATATGCCATCTGAAGATGAGGATGTTTGTCCAACATGCCTGGAAGATTATACACGAGAGAATCCGAAGATAACAACCAAATGTGCACATCATTTCCACCTCGGGTGCATCTACGAGTGGATGGAGAGAAGTGACAGTTGTCCTGTCTGTGGCAAGGTATCCTCAACTATTCCTCGTGTTTATAGGCTAAAATATTGA | 690 | 41.01 | MGSVCCCMNADEIENFVNSNGSVHRNCACLGCFFQNFLNVYTSLFRRGEMHAISSSVQGAASMASAASYDNSMPDMYHSPPRPLPYDADPRYIRLQRDGLVSRRDKGSSHLHEESEPLRSDVDRAEESLSGVDKLDSEDESKEHIYKSSLKISSVKATIGAENVYMPSEDEDVCPTCLEDYTRENPKITTKCAHHFHLGCIYEWMERSDSCPVCGKVSSTIPRVYRLKY | 229 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 11534859 | 11537220 | - | Bma001348.1 | Bma01g01095 | 75612 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma01g01095 | 229 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 152 | 220 | IPR013083 | - | |
Bma01g01095 | 229 | ProSiteProfiles | Zinc finger RING-type profile. | 174 | 214 | IPR001841 | - | |
Bma01g01095 | 229 | SUPERFAMILY | RING/U-box | 168 | 221 | - | - | |
Bma01g01095 | 229 | SMART | ring_2 | 174 | 214 | IPR001841 | - | |
Bma01g01095 | 229 | PANTHER | ZINC FINGER, RING/FYVE/PHD-TYPE | 1 | 218 | - | - | |
Bma01g01095 | 229 | PANTHER | TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED | 1 | 218 | - | - | |
Bma01g01095 | 229 | MobiDBLite | consensus disorder prediction | 103 | 140 | - | - | |
Bma01g01095 | 229 | Pfam | Ring finger domain | 173 | 214 | IPR001841 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g01095 | Bma-Chr1:11534859 | Bma01g02022 | Bma-Chr1:74863561 | 1.66E-10 | dispersed | |
Bma01g01081 | Bma-Chr1:11397018 | Bma01g01095 | Bma-Chr1:11534859 | 1.08E-166 | transposed | |
Bma06g01322 | Bma-Chr6:50195810 | Bma01g01095 | Bma-Chr1:11534859 | 2.56E-52 | transposed | |
Bma14g00607 | Bma-Chr14:6595365 | Bma01g01095 | Bma-Chr1:11534859 | 1.39E-23 | transposed | |
Bma14g00703 | Bma-Chr14:7670777 | Bma01g01095 | Bma-Chr1:11534859 | 1.21E-19 | transposed | |
Bma01g01095 | Bma-Chr1:11534859 | Bma14g01059 | Bma-Chr14:12803159 | 4.52E-64 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma01g01095 | - | - | zju:107416681 | 340.117 |