Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g01107 AGAGCAACAATGTCCCCTGTTGATTCTTCACGTGAGGAGAATGTGTACATGGCGAAGTTGTCCGAACAGGCCGAACGCTATGAGGAAATGGTTGAGTTTATGGAGAAAGTTGCAAAGACTGTGGATGTCGATGAGCTGACTGTAGAGGAAAGAAATCTTCTATCTGTGGCTTATAAAAATGTGATTGGTGCTCGGAGGGCTTCATGGAGAATCATTTCTTCCATTGAGCAAAAGGAAGAGAGTAGGGGAAATGATGATCACGTCACAATCATTAAGGAATATCGAGGAAAGATTGAAAATGAACTTAGCAAGATCTGTGATGGGATTTTGAGCCTTCTCGAGTCACATCTCATCCCATCTGCATCATCTGCCGAGTCTAAAGTTTTTTATCTCAAAATGAAGGGTGATTATCACAGGTATCTTGCCGAGTTTAAGACTGGGGCTGAGAGGAAGGAAGCTGCCGAAAGCACTTTGTTTGCTTACAAGTCTGCTCAGGACATTGCTCTCGCAGATCTAGCTCCTACTCATCCAATTAGGCTTGGACTTGCACTTAATTTTTCAGTATTTTATTATGAAATACTGAATTCACCAGATCGCGCTTGCAATCTTGCAAAGCAGGCTTTTGACGAGGCTATTGCTGAGTTGGATACGTTGGGTGAGGAGTCATACAAGGATAGTACATTGATCATGCAACTTCTCCGTGACAATTTGACTCTGTGGACCTCTGATATTACGGTCTCTCTCTCTCTCTCT 753 43.03 RATMSPVDSSREENVYMAKLSEQAERYEEMVEFMEKVAKTVDVDELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVTIIKEYRGKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLFAYKSAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDITVSLSLS 251
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11652850 11654282 + Bma030229 Bma01g01107 75624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g01107 251 SMART 1433_4 11 249 IPR023410 -
Bma01g01107 251 Coils Coil 17 37 - -
Bma01g01107 251 ProSitePatterns 14-3-3 proteins signature 1. 51 61 IPR023409 -
Bma01g01107 251 PANTHER 14-3-3-LIKE PROTEIN GF14-F 8 246 - -
Bma01g01107 251 PRINTS 14-3-3 protein zeta signature 94 118 IPR000308 -
Bma01g01107 251 PRINTS 14-3-3 protein zeta signature 125 147 IPR000308 -
Bma01g01107 251 PRINTS 14-3-3 protein zeta signature 187 213 IPR000308 -
Bma01g01107 251 PRINTS 14-3-3 protein zeta signature 45 74 IPR000308 -
Bma01g01107 251 PRINTS 14-3-3 protein zeta signature 214 243 IPR000308 -
Bma01g01107 251 PRINTS 14-3-3 protein zeta signature 160 186 IPR000308 -
Bma01g01107 251 Gene3D - 2 247 IPR036815 -
Bma01g01107 251 SUPERFAMILY 14-3-3 protein 10 243 IPR036815 -
Bma01g01107 251 ProSitePatterns 14-3-3 proteins signature 2. 223 242 IPR023409 -
Bma01g01107 251 PANTHER 14-3-3 PROTEIN 8 246 IPR000308 -
Bma01g01107 251 Pfam 14-3-3 protein 17 241 IPR023410 -
Bma01g01107 251 PIRSF 14-3-3 6 248 IPR000308 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01107 Bma-Chr1:11652850 Bma14g01097 Bma-Chr14:13688336 9.16E-166 dispersed
Bma01g01107 Bma-Chr1:11652850 Bma02g00465 Bma-Chr2:7344096 5.89E-171 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g01107 K06630 - cit:102617582 456.832