Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g01121 TCCAACTCAATGGCTAAGGTGGTATTAACACTAATAGCACTAAAAATCTTCACATTATTGTTTTTGCTGATCATAATTAAGACAGTTTATGAAACCATCTCGACCTATTGGCTGATCCCTCGACGAATCAAGAAGGCGATGGAGAAACAAGGAGTGAGTGGACCAAAACCACGCCCCCTCATCGGTAATATCTCGGACATTGCTTTACTTCTTTACAAATCCACCTCCAAACCCATGAACGCCATCGACCATGACATCGTTCCTCGCTTATTGCCTCACTACTTAGCCTGGTCAAAGCAATATGGAAAAAGATTTGTATACTGGAACGGGAGTGAGCCAAGAATGTGCATCACGGAGATAGAACTAATCAAACAGCTATTGGGGAAGAACAGTGCAGTTTCCGGAAAATCATGGCTTCAACAGCAAGGGTCCAAGCATTTTATTGGACGGGGGTTGTTAATGGCTAACGGTGAAGAATGGTATCACCAGCGACACATTCTCGCACCGGCCTTCACAAGAGATAAGCTCAAAGGCTATGGGGAGTTCATGGTGGAATGCACCATGAAGATGATTGAAACACTTGACAATCAAGTCAAGCAGGGACAGATAGAGTTCGAGATTGGCGAGTATATGAGGAGGCTCACAACTGATATCATTTCCCAGACTGAATTCGACAACAGCTCAGACAAGGGGAAGAAAATATTCCATTTGCTTAACCAGCTACAGAATCTATGTGCCCAAGCCAGCAGACACTTATACTTACCTGGAAATTTTTTCCTAAGTAAATATAATAGAGAAATAAAATCATTGAAGAAGGAGGTGGAGAGATTACTGATGGAGATCATTCAAAGCAGAAAAGACTCTGTAGAAATTGGGAGGAGCCCTTGTTATGGAAAAGACTTACTGGGGATGTTGCTGAATGAGAGGCAGAAGAAGGGATTTCGCTTAAATTTGCAGCTCATCATGGATGAATGTAAAACATTCTTCTTTGCTGGCCATGAAACCACTGCCCTCTTACTCACATGGACTATTATGTTACTAGCCACGAACCCTTCTTGGCAGGAAAAAGTTCGCGCCGAGGTTAAGCAGGTCTTCGATGGAGAAAATCCAGCCATTGATCATCTCTCCAAGCTCAACTTGTTAAGTATGGTCATAAATGAATCCCTAAGACTCTACCCACCAGCCACCGTTCTACCAAGAATGGCCTTGGAAGATATGAAACTAGGCGACCTATACATACCCAAAGGGTTATCAATATGGATTCCAGTGCTAGCCATTCATCACAGTGAAGAACTATGGGGAGAAGATGCAAATAAGTTTAACCCTCAAAGATTTGCTTCCAAATCATCCTCTCCTGGTCGGTTTATTCCTTTTGCAGCTGGACCTAGAAACTGTATTGGCCAAGCCTTTGCTATCATGGAAGTGAAGATCATATTATCGATGCTGATTTCGAGGTTTAGCTTCACTATTTCCAATAATTATACCCATGCTCCTATTGTTATCCTCACGATTAAGCCTAAGTATGGGGTTCAAGTTCATTTGATGCCGATTAACAGATGA 1560 42.44 SNSMAKVVLTLIALKIFTLLFLLIIIKTVYETISTYWLIPRRIKKAMEKQGVSGPKPRPLIGNISDIALLLYKSTSKPMNAIDHDIVPRLLPHYLAWSKQYGKRFVYWNGSEPRMCITEIELIKQLLGKNSAVSGKSWLQQQGSKHFIGRGLLMANGEEWYHQRHILAPAFTRDKLKGYGEFMVECTMKMIETLDNQVKQGQIEFEIGEYMRRLTTDIISQTEFDNSSDKGKKIFHLLNQLQNLCAQASRHLYLPGNFFLSKYNREIKSLKKEVERLLMEIIQSRKDSVEIGRSPCYGKDLLGMLLNERQKKGFRLNLQLIMDECKTFFFAGHETTALLLTWTIMLLATNPSWQEKVRAEVKQVFDGENPAIDHLSKLNLLSMVINESLRLYPPATVLPRMALEDMKLGDLYIPKGLSIWIPVLAIHHSEELWGEDANKFNPQRFASKSSSPGRFIPFAAGPRNCIGQAFAIMEVKIILSMLISRFSFTISNNYTHAPIVILTIKPKYGVQVHLMPINR 519
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11849613 11852340 + Bma001381.1 Bma01g01121 75638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g01121 519 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g01121 519 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g01121 519 PRINTS P450 superfamily signature 383 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g01121 519 PRINTS P450 superfamily signature 331 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g01121 519 Pfam Cytochrome P450 98 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g01121 519 Gene3D Cytochrome P450 36 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g01121 519 PANTHER CYTOCHROME P450 FAMILY MEMBER 20 513 - -
Bma01g01121 519 PRINTS E-class P450 group I signature 340 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g01121 519 PRINTS E-class P450 group I signature 423 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g01121 519 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g01121 519 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g01121 519 PRINTS E-class P450 group I signature 320 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g01121 519 PRINTS E-class P450 group I signature 98 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g01121 519 SUPERFAMILY Cytochrome P450 54 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g01121 519 PANTHER CYTOCHROME P450 FAMILY PROTEIN 20 513 - -
Bma01g01121 519 Coils Coil 260 287 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01121 Bma-Chr1:11849613 Bma13g00215 Bma-Chr13:3133433 0 dispersed
Bma01g01203 Bma-Chr1:13771592 Bma01g01121 Bma-Chr1:11849613 6.13E-47 dispersed
Bma01g01121 Bma-Chr1:11849613 Bma07g01122 Bma-Chr7:44850186 9.13E-110 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g01121 K10717 - csin:114317518 774.237