Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g01132 ATGGGTGAAATTCCATTTTTGTCGTGTTCTTACAATTGGTACTCGAGCTGTAACAACACATTCGACTGCGGAGGGATCACCGGCGTTGGATTCCCGTTCTGGGGAGGTAGTCGGCCGGAAGGTTGTGGGCATCCTTCTCTGAAGCTCAGCTGCAACGCAAGTACAACGAGCATAAACATTACGGGGGTAAATTATCGAGTTCTGGTATTATCGGAAAACACGCAGACTCTCACGATCGCGAGAGCCGATTTCGCCGACGATCTCTGCCCACCCATATTCCTTAACACCACTCTTGATTACAACCTGTTTGATATGATTCCTGGGTTTCATAACATCTCTCTAATCTACTGCATATCTTCAACTGGACACCTCGCCGGACAATTCAACTGTTCTTCGTTTCAATTTGGGTACATTCAAGCCGGCGCTGTTGGTCCCGTATTTTGCAACGCTAGTGTGGTTATTCCGATTTCGTTGTCCAATTTAGCTAATATTTTGGATTCATCTAGAGCGTTTCAGGCCATTCAACAAGGATTCGATGTGCAGTGGAAGGTGGGCAAGGAAGCTTGTGACGAGTGCATAAAATCCAAGGGTGTTTGTGGTTATGATCTGAGTTCGAATCAAACTAAATGCTATTGCCAAGGTCAGGCTATTGGGTCCGACTCTTGTCCTGTACAGAACACTGGAGCCCCAAACCCTTCACCAGGTGTTTCGGTTGGATGTGCAGCCATTTTGGGTCTGCTTTTAGGCTGCAGGGTGGTCTTTGTTAGACAAAAAAAGAAGAAGTTAGCATTTCAGTCTAAATGCAAAGACCTTCCTTCCCCTCCTTCAAGCAATGGCATTTCCTCTCCCTCTACAAACCTCTCCAAAAGCATTCCTTCTTATCCCTATTCGAAATTCATCTCTGAGAAGGGAGGGAGCAAGAGCAACTACTTTGGAGCACAAGTCTTTAGCTACGAAGAACTCCAAGAAGCCACCGATAATTTTCACGTGTCTAAAGAACTTGGAGACGGAGGCTTCGGAACGGTTTATTATGGCACGCTACGAGACAACCGAGCTGTTGCCGTTAAGCGCCTTTATGAACATAATTTGAAACGCGTAGAGCAGTTCCAGAATGAAGTAGAGATTCTCACTCGTTTGCAACACCCTAACCTCGTGAAGCTTTACGGATGCACATCGAGACATAGCCAAGAGCTCCTCCTCGTATATGAATTCGTTTCGAATGGAACAGTGGCATACCATCTCAATAGAAACAGAGCTAACTCCGGTTTGCTCACTTTGCCTCTTCGATTGAGAATCGCCATAGAGACAGCCGATGCTCTGGCTTACCTCCATAGATCGGACATTATTCATCGAGATGTCAAAACCGACAACATTCTTCTCGACCACAACTTTCACGTAAAAGTGGCTGATTTCGGGTTATCGAGGCTTTTTCCAACGAATGTGACCCATGTTTCAACGGCCCCACAAGGGACTCCTGGATACGTCGATCCGGAGTATTACCAGTGCTACCATCTTACTGATAAGAGTGATGTTTATAGCTTTGGGGTGGTCTTGATCGAGTTAATATCGTCATTACAAGCAGTCGATACGTCCAGGCATCGAATGGATATCAATTTGGCCAACATGGCAGTCAATAAAATTCAAAAACATGCATTGGTCGAGTTAGTCGATCCATCTCTCGGGTTTGAAAAGGATTATGCAGCGAGAAGGATTATAGAATTGATAGCAGAATTGGCTTTTCAGTGTTTACAAGTCGAGAGAGATGCAAGACCTTCTATGAGTAAAGTCTTGGAGGCCTTAAGAGGACTAGAGAACGAAGAATTGACAGCTCGAAAAGCTGAAGTAGTCGATTTTGGAGACGACGATGTAGGACTTTTAAGGAACATGCCCTCCCCGTTTTCGCCGGACAATTTTGTGACCGATAAATGGCCATCTGAGTATAATACATATTCGGACATTGATGCGGTATATAACTGCCTCAAGGAACAGTATGGAGTTAGAGATGAAGAATTAATATTATATGGTCAGTCTGTCGGTAGTGGTCCCACTCTCGATCTAGCCTCGCGCATATCAAATTTGAAAGGTGTTGTTTTGCATAGTCCCATTTTGTCTGGATTAAGGGTGTTGTACCCTGCTAGACGTACATATTGGTTTGATATCTACAAGAATATTGACAAGATTGGTATGGTAAACTGTCCTATTCTCATTATACATGGAACATCTGATGAAGTTGTGGATTGCTCGCACGCAAAGCAACTTTGGGAGCTTTGTCAACAAAAGTATGAGCCTCTTTGGCTAAGCGGGGGTGGGCATTGCAATCTCGAGCTTTACCCAGAATACATTAAACATCTAAAGAAATTTGTGATCTCACTTGGGAAATCAAAATCAGGTGGAAATGGTTTTGGCAAAACCAAGGGAACTTCAAACTCTAAGAATAAACCAGCTGACACAGAAGCCAAATTTCTTGAAGGTTCTAGAAACAGCTTAGACAGCCGAGTGGACAAGGATAGAAAGTCAAACAAGCCCGAAAAGTGTCGCACGAGCACTGACCATATCAACAAGGTTAGGCTCTATTACTCTGATTGA 2586 44.2 MGEIPFLSCSYNWYSSCNNTFDCGGITGVGFPFWGGSRPEGCGHPSLKLSCNASTTSINITGVNYRVLVLSENTQTLTIARADFADDLCPPIFLNTTLDYNLFDMIPGFHNISLIYCISSTGHLAGQFNCSSFQFGYIQAGAVGPVFCNASVVIPISLSNLANILDSSRAFQAIQQGFDVQWKVGKEACDECIKSKGVCGYDLSSNQTKCYCQGQAIGSDSCPVQNTGAPNPSPGVSVGCAAILGLLLGCRVVFVRQKKKKLAFQSKCKDLPSPPSSNGISSPSTNLSKSIPSYPYSKFISEKGGSKSNYFGAQVFSYEELQEATDNFHVSKELGDGGFGTVYYGTLRDNRAVAVKRLYEHNLKRVEQFQNEVEILTRLQHPNLVKLYGCTSRHSQELLLVYEFVSNGTVAYHLNRNRANSGLLTLPLRLRIAIETADALAYLHRSDIIHRDVKTDNILLDHNFHVKVADFGLSRLFPTNVTHVSTAPQGTPGYVDPEYYQCYHLTDKSDVYSFGVVLIELISSLQAVDTSRHRMDINLANMAVNKIQKHALVELVDPSLGFEKDYAARRIIELIAELAFQCLQVERDARPSMSKVLEALRGLENEELTARKAEVVDFGDDDVGLLRNMPSPFSPDNFVTDKWPSEYNTYSDIDAVYNCLKEQYGVRDEELILYGQSVGSGPTLDLASRISNLKGVVLHSPILSGLRVLYPARRTYWFDIYKNIDKIGMVNCPILIIHGTSDEVVDCSHAKQLWELCQQKYEPLWLSGGGHCNLELYPEYIKHLKKFVISLGKSKSGGNGFGKTKGTSNSKNKPADTEAKFLEGSRNSLDSRVDKDRKSNKPEKCRTSTDHINKVRLYYSD 861
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11959396 11968825 - Bma001390.3 Bma01g01132 75649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g01132 861 Gene3D Transferase(Phosphotransferase) domain 1 405 617 - -
Bma01g01132 861 PANTHER - 11 638 - -
Bma01g01132 861 MobiDBLite consensus disorder prediction 270 286 - -
Bma01g01132 861 Pfam Wall-associated receptor kinase C-terminal 147 214 IPR032872 -
Bma01g01132 861 MobiDBLite consensus disorder prediction 800 815 - -
Bma01g01132 861 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 11 638 IPR044652 -
Bma01g01132 861 Gene3D Phosphorylase Kinase; domain 1 301 404 - -
Bma01g01132 861 MobiDBLite consensus disorder prediction 267 286 - -
Bma01g01132 861 MobiDBLite consensus disorder prediction 800 847 - -
Bma01g01132 861 MobiDBLite consensus disorder prediction 816 847 - -
Bma01g01132 861 ProSiteProfiles Protein kinase domain profile. 328 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g01132 861 Gene3D alpha/beta hydrolase 631 776 IPR029058 -
Bma01g01132 861 SMART serkin_6 328 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g01132 861 SUPERFAMILY Protein kinase-like (PK-like) 307 604 IPR011009 -
Bma01g01132 861 Pfam Protein tyrosine and serine/threonine kinase 329 600 IPR001245 GO:0004672|GO:0006468
Bma01g01132 861 ProSitePatterns Protein kinases ATP-binding region signature. 334 356 IPR017441 GO:0005524
Bma01g01132 861 SUPERFAMILY alpha/beta-Hydrolases 641 788 IPR029058 -
Bma01g01132 861 Pfam Wall-associated receptor kinase galacturonan-binding 17 81 IPR025287 GO:0030247
Bma01g01132 861 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01132 Bma-Chr1:11959396 Bma08g00058 Bma-Chr8:741666 9.02E-151 dispersed
Bma14g01391 Bma-Chr14:26066055 Bma01g01132 Bma-Chr1:11959396 3.90E-37 dispersed
Bma14g01106 Bma-Chr14:13884990 Bma01g01132 Bma-Chr1:11959396 0 transposed
Bma01g00774 Bma-Chr1:7119566 Bma01g01132 Bma-Chr1:11959396 6.06E-84 transposed
Bma09g00327 Bma-Chr9:28302473 Bma01g01132 Bma-Chr1:11959396 3.67E-82 transposed
Bma01g01132 Bma-Chr1:11959396 Bma02g00485 Bma-Chr2:7888857 4.88E-123 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66275 PF07714 PK_Tyr_Ser-Thr 5.60E-49 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g01132 - - mcha:111016973 790.801