Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma01g01143 | ATGGAGCACTTGTTGGGTCTTCTTAAAATTCATGTCTACAGGGGTGTCAACCTCGCTGTGAGGGATGTAACGACCAGTGACCCTTATGTTGTTTTCAAAATGGGAAAACAGCAGAAACTGAAAACTCATGTAGTGAAGAAAAACATTAATCCAGAGTGGAATGAAGAGTTGACCATGTCAATCGTTGATCCTTCTGAGCCGATTAAACTGTTTGTGTACGACAAAGATACGTTTTCATGCGATGACAAAATGGGAGAGGCCGAGTTTGAGATTGGAATGTTCCTGGAAGCCATGAGAATGCGCTTCAATGGCCTCGCAAACGGAACGATTATAATGAGGATTCAACCGTCGAGGCAAAATTGCTTAGCCGAAGAGAGTAGTATTGTTTGGGAAGGAGGGCAAGTTTTCCAAAACTTGTTCCTCAGACTCAGAAACGTGGAATCGGGTGAAATTCAGTTGAAGCTGCACTGGGTTGATATTCCTGGCTCAAGAGGTTTATAG | 501 | 43.31 | MEHLLGLLKIHVYRGVNLAVRDVTTSDPYVVFKMGKQQKLKTHVVKKNINPEWNEELTMSIVDPSEPIKLFVYDKDTFSCDDKMGEAEFEIGMFLEAMRMRFNGLANGTIIMRIQPSRQNCLAEESSIVWEGGQVFQNLFLRLRNVESGEIQLKLHWVDIPGSRGL | 166 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 12393069 | 12394257 | - | Bma001404.1 | Bma01g01143 | 75660 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma01g01143 | 166 | Gene3D | C2 domain | 4 | 164 | IPR035892 | - | |
Bma01g01143 | 166 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4-LIKE | 1 | 164 | - | - | |
Bma01g01143 | 166 | CDD | C2_ArfGAP | 5 | 149 | - | - | |
Bma01g01143 | 166 | Pfam | C2 domain | 6 | 93 | IPR000008 | - | |
Bma01g01143 | 166 | SMART | C2_3c | 7 | 103 | IPR000008 | - | |
Bma01g01143 | 166 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4 | 1 | 164 | IPR044562 | - | |
Bma01g01143 | 166 | ProSiteProfiles | C2 domain profile. | 1 | 104 | IPR000008 | - | |
Bma01g01143 | 166 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 2 | 159 | IPR035892 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g01143 | Bma-Chr1:12393069 | Bma03g00910 | Bma-Chr3:9076041 | 4.53E-80 | dispersed | |
Bma06g00437 | Bma-Chr6:16577021 | Bma01g01143 | Bma-Chr1:12393069 | 6.69E-41 | dispersed | |
Bma01g01143 | Bma-Chr1:12393069 | Bma02g00511 | Bma-Chr2:10166749 | 5.35E-97 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma01g01143 | - | - | qsu:112031486 | 263.462 |