Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g01143 ATGGAGCACTTGTTGGGTCTTCTTAAAATTCATGTCTACAGGGGTGTCAACCTCGCTGTGAGGGATGTAACGACCAGTGACCCTTATGTTGTTTTCAAAATGGGAAAACAGCAGAAACTGAAAACTCATGTAGTGAAGAAAAACATTAATCCAGAGTGGAATGAAGAGTTGACCATGTCAATCGTTGATCCTTCTGAGCCGATTAAACTGTTTGTGTACGACAAAGATACGTTTTCATGCGATGACAAAATGGGAGAGGCCGAGTTTGAGATTGGAATGTTCCTGGAAGCCATGAGAATGCGCTTCAATGGCCTCGCAAACGGAACGATTATAATGAGGATTCAACCGTCGAGGCAAAATTGCTTAGCCGAAGAGAGTAGTATTGTTTGGGAAGGAGGGCAAGTTTTCCAAAACTTGTTCCTCAGACTCAGAAACGTGGAATCGGGTGAAATTCAGTTGAAGCTGCACTGGGTTGATATTCCTGGCTCAAGAGGTTTATAG 501 43.31 MEHLLGLLKIHVYRGVNLAVRDVTTSDPYVVFKMGKQQKLKTHVVKKNINPEWNEELTMSIVDPSEPIKLFVYDKDTFSCDDKMGEAEFEIGMFLEAMRMRFNGLANGTIIMRIQPSRQNCLAEESSIVWEGGQVFQNLFLRLRNVESGEIQLKLHWVDIPGSRGL 166
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 12393069 12394257 - Bma001404.1 Bma01g01143 75660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g01143 166 Gene3D C2 domain 4 164 IPR035892 -
Bma01g01143 166 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4-LIKE 1 164 - -
Bma01g01143 166 CDD C2_ArfGAP 5 149 - -
Bma01g01143 166 Pfam C2 domain 6 93 IPR000008 -
Bma01g01143 166 SMART C2_3c 7 103 IPR000008 -
Bma01g01143 166 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 164 IPR044562 -
Bma01g01143 166 ProSiteProfiles C2 domain profile. 1 104 IPR000008 -
Bma01g01143 166 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 159 IPR035892 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01143 Bma-Chr1:12393069 Bma03g00910 Bma-Chr3:9076041 4.53E-80 dispersed
Bma06g00437 Bma-Chr6:16577021 Bma01g01143 Bma-Chr1:12393069 6.69E-41 dispersed
Bma01g01143 Bma-Chr1:12393069 Bma02g00511 Bma-Chr2:10166749 5.35E-97 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g01143 - - qsu:112031486 263.462