Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g01148 ATGGCGGGATTAGTGTCAACCGCTAGCATTCAACCGACAGCTTATGCGCTTTCCTCCACAATTAAGCAACTGGGTTGCAGCCCTATTTTTTCTCAGAACTTGGCCTTGTTTACTAACTATACCACCCAGTGCGTGAGGAGGAATCGTGGACTCAGACGTTGTTTCGCCACTTCAATGGCGTCTAACCCTATCGAAGTCTGCGTCAAGGCCTCCATCACTGTACCCAATAAGCTCGGTGATTGTCCCTTCTGCCAAAGGGTACTGCTAACCTTGGAGGAAAAACATTTACCTTACGACATCAAGTTGGTAGATTTGACTAACAAGCCAGAATGGTTCCTAGAAATTAATGCAGATGGAAAAGTTCCCGTCATCAAACTCGAAGAAAAGTGGATTGCAGATTCAGATGTTATAACACAATTGCTCGAAGAGAAATACCCAAATCCACCATTGGCTACTCCACCTGCAAAGTCATCAGTTGGGTCAAAGATCTTTTCCACCTTTATTGGTTTTCTCAAAAGCAAAGACTCCGCCGATGGAACAGAACAAGCTTTGCTAAGTGAGCTAAGTTCCTTCAATGATTATATCAAAGAGAATGGTCCTTTCATAAACGGCCAAGAGGTATCGGCTGCAGACTTGTCTCTCGGACCGAAGTTGTATCATCTCGAAATTGCATTAGCACACTATAAGAATTGGTTGATTCCGGACACCCTACCTTATGCGAAGTTTTATACAAAGGAACTATTTTCAAAGGAATCATTTGTGAAAACTCGAGCTGTTCCCGAGGATGTCATTGTCGGCTGGCGGCCTAAAGTATTTGGTTGA 822 43.8 MAGLVSTASIQPTAYALSSTIKQLGCSPIFSQNLALFTNYTTQCVRRNRGLRRCFATSMASNPIEVCVKASITVPNKLGDCPFCQRVLLTLEEKHLPYDIKLVDLTNKPEWFLEINADGKVPVIKLEEKWIADSDVITQLLEEKYPNPPLATPPAKSSVGSKIFSTFIGFLKSKDSADGTEQALLSELSSFNDYIKENGPFINGQEVSAADLSLGPKLYHLEIALAHYKNWLIPDTLPYAKFYTKELFSKESFVKTRAVPEDVIVGWRPKVFG 273
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 12456864 12459561 + Bma001409.1 Bma01g01148 75665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g01148 273 SFLD Main (cytGST) 80 229 - -
Bma01g01148 273 Gene3D Glutaredoxin 63 150 - -
Bma01g01148 273 SFLD Glutathione Transferase (cytosolic) 80 229 IPR040079 -
Bma01g01148 273 CDD GST_N_family 81 142 - -
Bma01g01148 273 SUPERFAMILY Thioredoxin-like 79 148 IPR036249 -
Bma01g01148 273 SUPERFAMILY GST C-terminal domain-like 144 271 IPR036282 -
Bma01g01148 273 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 71 149 IPR004045 -
Bma01g01148 273 Pfam Glutathione S-transferase, N-terminal domain 80 149 IPR004045 -
Bma01g01148 273 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 6 272 IPR044627 GO:0033355|GO:0045174|GO:0098869
Bma01g01148 273 PANTHER GLUTATHIONE S-TRANSFERASE DHAR3, CHLOROPLASTIC 6 272 - -
Bma01g01148 273 Gene3D - 151 272 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01148 Bma-Chr1:12456864 Bma03g00309 Bma-Chr3:2312307 2.92E-78 dispersed
Bma01g01148 Bma-Chr1:12456864 Bma06g00175 Bma-Chr6:2208313 7.36E-06 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g01148 K21888 - ming:122078463 405.601