Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g01169 ATGCCGGAAAATTCGATCCCGAAGGAGGCGGCGTACCAGATAATCAACGACGAGCTGATGCTGGACGGAAATCCGAGGCTGAATCTGGCGTCCTTCGTGACGACGTGGATGGAGCCGGAGTGCGACAAGCTGATCATGTCCTCCATTAACAAGAACTACGTTGACATGGATGAATACCCGGTGACCACTGAGCTTCAGAATCGATGTGTGAACATTATAGCTCACCTTTTCAATGCGCCGCTTGGAGAGTCAGAGACGGCGGTGGGCGTCGGAACGGTGGGGTCGTCGGAGGCCATCATGCTTGCCGGCTTGGCTTTCAAGCGAAAATGGCAGAACAGAAGGAAAACAGAGGGCAAACCCTGTGATAAGCCCAACATCGTCACTGGAGCTAATGTCCAGGTTTGCTGGGAGAAATTTGCAAGGTACTTTGAGGTGGAGCTGAAGGAGGTGAAGCTGAGGGAAGGGTATTATGTGATGGACCCAAAGAAAGCGGTGGAGATGGTCGACGAGAACACCATCTGCGTCGCTGCAATTCTGGGTTCTACTCTAAACGGAGAATTCGAGGACGTCAAACTCTTGAACGATCTCTTGATCCAGAAAAACAAGCAAACTGGAAATGTCATGGAAAATTGCCGAGAAAACGCGATAGTGCTGAGAGAAGGACTGGAAAATACGGGACGTTTCACCATAGTCTCCAAAGATGACGGAGTCCCACTAGTTGCTTTCTCTTTCAAAGACAACAGCTGCCACAACGAGTTTGAAATCTCCGAAATGTTGAGGCGCTTTGGGTGGATAGTCCCGGCCTACACCATGCCAGCCGATGCACAACACATAACAGTGCTGAGGGTCGTAATACGTGAAGATTTTTCTCGCACACTCGCTGAACGCCTGGTCTTTGATATCGAAAAAGTTTTGCATGAACTCGACACCCTTCCTGCGCGAGTGATTACAACTAAATTAGAAGCCACTAAATTAGAAGTCAGCAAGGAAACGGCCCCGGAGAGTGGGACTGTAACTGTGATCATTAAGAAGAGCGACGAGGAGGTCGAGAGGGAGGTGTCTACGATTTGGAAGATGTTTGTGGCTAATAAGAAGAAGAAGAAGAATGGTGTCTGCTAG 1119 49.42 MPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMSSINKNYVDMDEYPVTTELQNRCVNIIAHLFNAPLGESETAVGVGTVGSSEAIMLAGLAFKRKWQNRRKTEGKPCDKPNIVTGANVQVCWEKFARYFEVELKEVKLREGYYVMDPKKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLIQKNKQTGNVMENCRENAIVLREGLENTGRFTIVSKDDGVPLVAFSFKDNSCHNEFEISEMLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVFDIEKVLHELDTLPARVITTKLEATKLEVSKETAPESGTVTVIIKKSDEEVEREVSTIWKMFVANKKKKKNGVC 372
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 12911966 12919459 - Bma001438.2 Bma01g01169 75686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g01169 372 SUPERFAMILY PLP-dependent transferases 1 205 IPR015424 -
Bma01g01169 372 Gene3D - 1 34 - -
Bma01g01169 372 Gene3D - 35 222 IPR015421 GO:0003824
Bma01g01169 372 SUPERFAMILY PLP-dependent transferases 206 308 IPR015424 -
Bma01g01169 372 Gene3D - 225 312 - -
Bma01g01169 372 PANTHER GLUTAMATE DECARBOXYLASE 1 205 - -
Bma01g01169 372 PANTHER GLUTAMATE DECARBOXYLASE 206 372 - -
Bma01g01169 372 Pfam Pyridoxal-dependent decarboxylase conserved domain 2 201 IPR002129 GO:0016830|GO:0019752|GO:0030170
Bma01g01169 372 PANTHER GLUTAMATE DECARBOXYLASE 1 205 IPR010107 GO:0004351|GO:0006536|GO:0030170
Bma01g01169 372 PANTHER GLUTAMATE DECARBOXYLASE 206 372 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01169 Bma-Chr1:12911966 Bma13g00281 Bma-Chr13:4759971 1.31E-75 dispersed
Bma01g01169 Bma-Chr1:12911966 Bma02g00560 Bma-Chr2:11649214 7.75E-93 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g01169 K01580 - pop:7468337 403.675