Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma01g01181 | ATGGCGTCTTCCTCAAATTCCCCTTGTGCAGCCTGCAAGTTTCTCCGCCGGAAATGTCAACCGGAGTGCGTTTTCGCGCCGTACTTTCCACCAGACCAACCCCAAAAGTTCGCCAACGTCCACAAGGTGTTCGGCGCAAGCAACGTCACCAAGCTCCTCAACGAGCTCCATCCTCACCAGCGAGAAGACGCCGTCAACTCCCTTGCCTACGAGGCCGATATGCGTCTCAGAGATCCAGTCTATGGGTGCGTCGGCGTCATCTCCCTCCTCCAGCACCAGCTTCGCCAGCTTCAGATTGACCTCAGCTGCGCAAAATCTGAGCTCTCAAAATACCAAAACCTGGGTCTCGCCGGCCATGGCCTCATCGCAGCTGCTGCTGCCGCTGCCACTACGACTCATAACCACCATCTCCAGAACCTCGGAATCAACCTGATTGGCTCCGGGAAAGATTACCACCACCACCACCAGTTATTCCCTCGCGATCAGGCCCAGCCGATCATGAGGGGCTTCGACATTGCCGGAAACAGTGTCTATGACGGCGGCCTCCTAGCAATGAACGTCTCCGCAAGTTTAGGTCAACTCAGCCAATTTCAGCAACCGAGGGCTGCCGGAGGCGATGATCACCGCCGAACAATCGATCCTTCTTAA | 648 | 56.33 | MASSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQNLGLAGHGLIAAAAAAATTTHNHHLQNLGINLIGSGKDYHHHHQLFPRDQAQPIMRGFDIAGNSVYDGGLLAMNVSASLGQLSQFQQPRAAGGDDHRRTIDPS | 215 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 13295367 | 13296014 | - | Bma001456.1 | Bma01g01181 | 75698 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma01g01181 | 215 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 3 | 181 | - | - | |
Bma01g01181 | 215 | ProSiteProfiles | LOB domain profile. | 7 | 108 | IPR004883 | - | |
Bma01g01181 | 215 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 6-LIKE | 3 | 181 | - | - | |
Bma01g01181 | 215 | Pfam | Lateral organ boundaries (LOB) domain | 8 | 105 | IPR004883 | - | |
Bma01g01181 | 215 | Coils | Coil | 87 | 114 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g01181 | Bma-Chr1:13295367 | Bma06g00422 | Bma-Chr6:15286261 | 1.34E-58 | dispersed | |
Bma01g01181 | Bma-Chr1:13295367 | Bma02g00579 | Bma-Chr2:12612407 | 1.61E-150 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
56712 | PF03195 | LOB | 4.10E-43 | No_clan | Bma | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma01g01181 | - | - | rcu:8263444 | 342.428 |