Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g01194 ATGGGGTCCTGCTTCTCGGCAGAGAGCAAGAGCCCTCTGCCTGGGTCGCCAATGTCTTCATCCCCGAGAGTCAGGAAAAACTCAAAGAAGAGACTTGGATCACAGAACCCTTTGTTTGATTATCGAAGGGATGAATCCCTGCATCGAGTTCCAGGAAGAATGTTCTTAAACGGATCTAGTGAGGTTGCTTCTCTATTTACTCAACAGGGTAAGAAAGGGACCAACCAGGACGCCATGATTAATTTTGCTTCGAGGTCGGATACATTATTTTGTGGAGTTTTCGATGGGCATGGCCCCTATGGCCATATTGTCGCAAAAAGAGTGAGGAATTGTCTTCCTCTGAAACTCGGTGAACATCTGGAAGTTAATTCAATCAGTGAGGATGTTCTTAAAGATATCAGTTTGAATACTGTAAGTATGAACTTCGAAGATACAGCTTTCGCATCGGCTGATGAAGAAGCAAGAGCCTCCATTGATGGCGATGAAACAAGCAAGCAGTCTGAGATTTCTAATTCTTTGAAGGAATCAATTCTTAAAGCTTTTAAGAATATGGACAGAGAACTGAGAATGCAGCCGAGGATCAACTGCTTCTTCAGTGGGACAACGGCAGTGACTCTTCTCAAGCAGGATCAAGATCTGATTATTGGAAATGTTGGAGACTCCAGAGCTGTTCTTGGTACGAGAGATGAAGATGATTTGCTTGTTGCAGTTCAGCTTACAGTGGATCTCAAGCCTGATCTTCCAGAGGAAGCAGAGAGAATCAAAAAGTGCAAAGGTCGAATATTTGCTCTTCGGGAAGAACCCGAGGTTGCTCGAGTGTGGCTTCCCAACAAGGACTCCCCTGGTCTTGCCATGGCTCGGGCATTTGGAGATTTCTGCCTCAAGGATTTTGGTGTCATTGCCATTCCCGACATTTCATGTCGACGCCTCACTGAAAAGGACGAGTTTGTCGTCTTGGCTACCGACGGGATATGGGATGTATTGTCGAACGAAGAGGTAGTAGACATAGTAGCTTCATCTCCGCGTCCAACTGCCGCTCGAGGTCTGGTCGAATCCGCGATCAAGGCATGGCGATATAAATATCCAACGTCAAAGATCGACGACTGTGCCGTTGTCTGTCTCTTTTTCGATGAAAACCCGAATCCTTCTTCACCCGATTCCTTCTCCAAACTCAAAGAAGAGCAAACTTCTGAAAACCATCTCCGCCCTGCAGCAGAGAATCCAGTTTAG 1230 46.1 MGSCFSAESKSPLPGSPMSSSPRVRKNSKKRLGSQNPLFDYRRDESLHRVPGRMFLNGSSEVASLFTQQGKKGTNQDAMINFASRSDTLFCGVFDGHGPYGHIVAKRVRNCLPLKLGEHLEVNSISEDVLKDISLNTVSMNFEDTAFASADEEARASIDGDETSKQSEISNSLKESILKAFKNMDRELRMQPRINCFFSGTTAVTLLKQDQDLIIGNVGDSRAVLGTRDEDDLLVAVQLTVDLKPDLPEEAERIKKCKGRIFALREEPEVARVWLPNKDSPGLAMARAFGDFCLKDFGVIAIPDISCRRLTEKDEFVVLATDGIWDVLSNEEVVDIVASSPRPTAARGLVESAIKAWRYKYPTSKIDDCAVVCLFFDENPNPSSPDSFSKLKEEQTSENHLRPAAENPV 409
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 13528313 13530880 - Bma001472.1 Bma01g01194 75711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g01194 409 SMART PP2C_4 51 374 IPR001932 -
Bma01g01194 409 Pfam Protein phosphatase 2C 146 353 IPR001932 -
Bma01g01194 409 CDD PP2Cc 62 376 IPR001932 -
Bma01g01194 409 SUPERFAMILY PP2C-like 58 378 IPR036457 -
Bma01g01194 409 PANTHER ALPHABET, ISOFORM E-RELATED 1 395 - -
Bma01g01194 409 MobiDBLite consensus disorder prediction 380 409 - -
Bma01g01194 409 MobiDBLite consensus disorder prediction 1 38 - -
Bma01g01194 409 PANTHER PROTEIN PHOSPHATASE 2C 33-RELATED 1 395 - -
Bma01g01194 409 MobiDBLite consensus disorder prediction 1 23 - -
Bma01g01194 409 Gene3D - 58 378 IPR036457 -
Bma01g01194 409 ProSiteProfiles PPM-type phosphatase domain profile. 62 376 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01194 Bma-Chr1:13528313 Bma14g01170 Bma-Chr14:17105289 0 dispersed
Bma01g01194 Bma-Chr1:13528313 Bma02g00594 Bma-Chr2:13543637 2.60E-64 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g01194 - - pvy:116141626 598.586