Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g01203 ATGACTACCAATGTCTCTTCTGTTCTTCAAGCATCTTCTTCGTTTTCATCTCCGCCGCTCCTCCAATCTAAATTTCACGCTCAAAGACCCGGACCCATTTCTCCGTTTTCCTCTTTGGATCTGCCCAGACGACGAACAGGAACGTCAGGCTTCTGTGTGATTCGATGTGCTTCTTCGAATGGACGGGAGCCTGAATCAGTGGAGAAAAATAGCGTTGAGGAAGTGGAGCGACTTCTTGGAGAGAAAAGACGTGCAGAGTTGTATTCTCGGATTGCGTCTGGAGAATTCACTGTTAAGAAGTCTGGCTTGACATCTCAGCTGAGGAATGGCTTGTCAAAGATGGGTGTTCCGAGTGAGATTCTAAATGTTTTATTTAGTTGGTATGATCCTTATGATCATCCTAAGATTCCAGAGGCCAAAGGGTCAATTAAATCCATGAGAAGTGAGGCCTTCTTCATACCATTATACGAGCTTTTTCTCACATACGGTGGAATGTTTAGGCTAAGCTTCGGGCCCAAGTCATTTGTGATAGTTTCTGATCCTTCCATCGCTAAGCATATATTGAAGGACAACTCAAAATCTTATTCGAAGGGGATCTTGGCTGAAATTCTTGAATTTGTAATGGGAAATGGACTGATTCCAGCTGATGGTGAGATCTGGCGTGTACGTCGACGAGCTATAGTCCCCGCGCTGCATAAGAAGTACGTAGCAGCTATGGTTAAGCTCTTCGGACAAGCAACCGATAGGCTTTGCAAGAAGCTAGACGCTGCTGATTCTGATGGAGAAGACGTGGAAATGGAGTCATTATTCTCTCGCTTGACTTTGGATATCATTGGAAAAGCTCTGTTTAATTATGATTTCGATTCATTGACAAATGATACTGGAATAGTTGAGGCAGTGTACACTGTACTAAGAGAAGCAGAAGATCGTAGTATTTCCCCGATTCCATTATGGGAAATTCCAATTTGGAGAGAAATTTCGCCCAGACAAAGAAAAGTTTCTAAAGCCCTCAAAGTAATTAACGACACACTTGATGATCTGATTGCGATATGCAAGAGGATGGTTGATGAAGAAGAACTACAATTTTCCGATGAATACATGAATGAACAAGATCCTAGTATATTACACTTCCTTTTGGCATCAGGAGATGATGTTTCAAGCAGGCAACTTCGCGATGACTTGATGACAATGCTTATAGCTGGGCATGAAACCTCTGCTGCAGTTTTAACCTGGACGTTTTATCTTCTTTCCAGGGATCCGGAGGTTGTGTCGAAATTGCAAGAGGAGGTTGATACAGTTTTGGGTGATCGATTTCCAACTGTTGAAGATATGAAGAAGCTCAAATACGCCACTCGAGTAATCAATGAATCCTTGAGGCTTTACCCACAACCACCTGTTTTAATACGTCGATCTATCAAGAATGACATTCTTGGCGGGTACCCAATCAAAAGAGGGGAGGATGTCTTCATTTCTGTTTGGAATTTGCATCATTCTCCAAAAGTTTGGGATGACGCAGAGAAGTTTAACCCAGAGAGATGGCCCTTGGATGGGCCAAACCCAAATGAAACAAACCAAAATTTCAGTTATTTGCCCTTTGGCGGCGGACCTCGGAAATGCATTGGTGACATGTTTGCTTCATTCGAGACTGTGGTGGCGCTTGCCATGCTTGTTCGTCGATTTAACTTTCAAATGGCTCTTGGAGCACCCGAGGTTAAGATGACTACAGGAGCAACAATTCACACGACGGACGGATTGAAAATGACTGTCACGCGAAGAACAAGACCTCCTATTTTGCCGACGCTAGAGATGCCATCGATAAAAGGAGATTCGGGCATTGGCCCGTCAGAAACGGATCTACCTATTGGCGTGAAAGCAGAAGTTTCTTCTGCCCCCCTATGA 1899 43.81 MTTNVSSVLQASSSFSSPPLLQSKFHAQRPGPISPFSSLDLPRRRTGTSGFCVIRCASSNGREPESVEKNSVEEVERLLGEKRRAELYSRIASGEFTVKKSGLTSQLRNGLSKMGVPSEILNVLFSWYDPYDHPKIPEAKGSIKSMRSEAFFIPLYELFLTYGGMFRLSFGPKSFVIVSDPSIAKHILKDNSKSYSKGILAEILEFVMGNGLIPADGEIWRVRRRAIVPALHKKYVAAMVKLFGQATDRLCKKLDAADSDGEDVEMESLFSRLTLDIIGKALFNYDFDSLTNDTGIVEAVYTVLREAEDRSISPIPLWEIPIWREISPRQRKVSKALKVINDTLDDLIAICKRMVDEEELQFSDEYMNEQDPSILHFLLASGDDVSSRQLRDDLMTMLIAGHETSAAVLTWTFYLLSRDPEVVSKLQEEVDTVLGDRFPTVEDMKKLKYATRVINESLRLYPQPPVLIRRSIKNDILGGYPIKRGEDVFISVWNLHHSPKVWDDAEKFNPERWPLDGPNPNETNQNFSYLPFGGGPRKCIGDMFASFETVVALAMLVRRFNFQMALGAPEVKMTTGATIHTTDGLKMTVTRRTRPPILPTLEMPSIKGDSGIGPSETDLPIGVKAEVSSAPL 632
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 13771592 13788285 - Bma001488.1 Bma01g01203 75720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g01203 632 MobiDBLite consensus disorder prediction 1 40 - -
Bma01g01203 632 Gene3D Cytochrome P450 133 597 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g01203 632 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 532 541 IPR017972 GO:0005506|GO:0016705
Bma01g01203 632 PRINTS E-class P450 group I signature 389 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g01203 632 PRINTS E-class P450 group I signature 529 539 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g01203 632 PRINTS E-class P450 group I signature 159 178 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g01203 632 PRINTS E-class P450 group I signature 491 515 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g01203 632 PRINTS E-class P450 group I signature 539 562 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g01203 632 PRINTS E-class P450 group I signature 409 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g01203 632 PRINTS E-class P450 group I signature 451 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g01203 632 Pfam Cytochrome P450 155 576 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g01203 632 MobiDBLite consensus disorder prediction 1 23 - -
Bma01g01203 632 SUPERFAMILY Cytochrome P450 147 592 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g01203 632 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g01203 632 PRINTS P450 superfamily signature 400 417 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g01203 632 PRINTS P450 superfamily signature 530 539 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g01203 632 PRINTS P450 superfamily signature 539 550 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g01203 632 MobiDBLite consensus disorder prediction 598 632 - -
Bma01g01203 632 PANTHER - 108 596 - -
Bma01g01203 632 PANTHER CYTOCHROME P450 FAMILY 4 108 596 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01203 Bma-Chr1:13771592 Bma01g01121 Bma-Chr1:11849613 6.13E-47 dispersed
Bma10g00685 Bma-Chr10:10382896 Bma01g01203 Bma-Chr1:13771592 2.43E-155 transposed
Bma01g01203 Bma-Chr1:13771592 Bma02g00606 Bma-Chr2:13853481 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g01203 K15747 - qsu:112021689 973.77