Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g01227 ATGGCGTTCTCGGAAAACTCCTCCCGTCACTCTCTCATCCCCAGCTTCCTCTACTCTACCACTTCCTCTACCAAATCCATAGCCGTCGAGAAGATGCTCCGGAATAGCCCTAGCGGCCTTTCTTCCCCCGCTCCTGCTGCCGATGCTATTCCGTCGTCGAAGAGCAGCTTTGTGATTCCGTCTCCAAGCGAGCAGAGCATGAAGATCGAGATGTACTCCCCGGCCTTCTACGCTGCGTGTACTGCTGGTGGAATCCTTAGCTGCGGTCTTACGCATATGGCTGTCACTCCTCTTGACCTTGTCAAATGTAATATGCAGATCGACCCAGCAAAATACAGAAGCATTTCATCCGGATTTGGGGTCTTGCTCAAAGAGCAGGGAGTTAGGGGCTTCTTTAGGGGTTGGGTGCCTACCCTGCTTGGTTACAGTGCTCAGGGTGCCTGCAAGTTTGGATTCTATGAATTTTTTAAGAAATACTACTCAGATATTGCTGGACCAGAATATGCTGCTAAGTATAAGACCTTAATTTATCTGGCTGGATCAGCATCTGCAGAGGTGATTGCAGATATTGCCCTTTGTCCCTTTGAAGCCGTGAAAGTCCGAGTTCAAACTCAACCTGGTTTTGCCAGAGGTCTGTCGGACGGCCTTCCTAAATTTGTCAGATCTGAAGGCACTCTTGGGTTGTATAAGGGTCTTGTTCCTCTCTGGGGACGTCAGATTCCATATACAATGATGAAGTTTGCATCTTTCGAAACTATTGTGGAGTTGCTCTATAAGCATGCTATTCCAACACCCAAGGACCAGTGCAGCAAAAATCTACAGCTTGGTGTTAGTTTTGCCGGTGGCTACGTAGCTGGTGTTTTTTGTGCAATTGTTTCTCATCCTGCTGATAACCTTGTTTCTTTTCTCAACAATGCCAAAGGGGCAACTGTCGGTGATGCTGTGAAGAAACTTGGTTTATGGGGTCTCTTTACCCGTGGGCTTCCCCTCCGTATTGTCATGATTGGAACACTCACTGGAGCTCAGTGGGGTATTTACGATGCATTCAAAGTTTTTGTGGGACTGCCAACTACTGGTGGTGTAACTCCTGCTCCAGCTGCTGCTGCTTCAGAACTTGCGAAAGTTTAG 1128 48.05 MAFSENSSRHSLIPSFLYSTTSSTKSIAVEKMLRNSPSGLSSPAPAADAIPSSKSSFVIPSPSEQSMKIEMYSPAFYAACTAGGILSCGLTHMAVTPLDLVKCNMQIDPAKYRSISSGFGVLLKEQGVRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIADIALCPFEAVKVRVQTQPGFARGLSDGLPKFVRSEGTLGLYKGLVPLWGRQIPYTMMKFASFETIVELLYKHAIPTPKDQCSKNLQLGVSFAGGYVAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGVTPAPAAAASELAKV 375
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 15251696 15254207 - Bma001524.1 Bma01g01227 75744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g01227 375 Gene3D Mitochondrial carrier domain 75 352 IPR023395 -
Bma01g01227 375 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 4 369 IPR044677 GO:0005315|GO:1990547
Bma01g01227 375 Pfam Mitochondrial carrier protein 78 161 IPR018108 -
Bma01g01227 375 Pfam Mitochondrial carrier protein 176 260 IPR018108 -
Bma01g01227 375 ProSiteProfiles Solute carrier (Solcar) repeat profile. 172 256 IPR018108 -
Bma01g01227 375 SUPERFAMILY Mitochondrial carrier 78 348 IPR023395 -
Bma01g01227 375 MobiDBLite consensus disorder prediction 38 57 - -
Bma01g01227 375 PANTHER MITOCHONDRIAL PHOSPHATE TRANSPORTER 4 369 - -
Bma01g01227 375 ProSiteProfiles Solute carrier (Solcar) repeat profile. 75 159 IPR018108 -
Bma01g01227 375 ProSiteProfiles Solute carrier (Solcar) repeat profile. 273 352 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01227 Bma-Chr1:15251696 Bma06g00281 Bma-Chr6:3948710 0 dispersed
Bma01g01227 Bma-Chr1:15251696 Bma07g01583 Bma-Chr7:51132075 8.27E-17 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g01227 K15102 - csv:101221771 600.512