Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g01233 ATGGAGCCAGAATCTGGGTTTGCTGCTTTTCGACAACCCTCCAAGTTTTCATGGACACATGTCTCTAGAAATCTCATCCTAGCATACCAAAGCTTTGGAGTAGTTTATGGAGATCTGAGCACATCACCGCTCTACGTTTATAAGAGCACATTTGTTGGGAAGTTGGAGAAACATCGAAACGAAGAAACCATATTTGGTGCATTTTCCTTGATTTTCTGGACTCTTACATTGATACCCTTATTGAAGTATGTCTTCATCTTACTGAGTGCTGACGATAATGGTGAAGGAGGAACATTTGCTCTCTATTCGTTGCTCTGCCGACATGCCAAGTTTAATCTGCTTCCCAACCAACAAGCAGCTGATGAGGAACTCTCAGCCTACAAATATGGCCCATCATCTCATATTGTTTCCTCTTCTCCACTGAAAAGGTTTTTGGAGAAGCATAAAACACTAAGAACTGCCCTGCTACTTGTTGTATTATTTGGTGCATGTATGGTCGTAGGGGATGGTGTGCTGACTCCTGCAATTTCAGTTCTATCATCAGTATCAGGATTACAATTTACTGAAGCTAAATTACACGATGGTGAAATCGTTTTGATTGCCTGTGTCATTTTAGTGGGGCTGTTTGCTCTGCAGCATTATGGCACCCACAAAGTTGCATTTGGATTTGCTCCAATTGTAATAATTTGGTTGCTTTCAATTTTCTCCGTTGGGCTGTACAACACAATACGGTGGAACCCAAAAATCGTCCGAGCGTTCTCTCCATATTATGTTGTCAAGTTCTTCAAAAGGACGGGTAAAGATGGTTTTATTTCTCTTGGAGGGATTCTTCTGTCCATAACTGGCACAGAAGCAATGTTTGCAGATCTTGGTCATTTTACTGCATCGTCGATAAGGATTGCGTTTGGATCGGTGATATATCCCTGCTTAGTGGTACAATACATGGGTCAAGCTGCTTTTCTGTCTAAAAACCTTGAATCCATTCCCAACAGTTTTTACGACTCAATTCCCGACCCTGTATTTTGGCCCGTCTTTGTCATCGCCACACTTGCAGCCATCGTGGGGAGTCAGGCCGTCATAACTGCGACTTTCTCCATCATCAAACAATGCCATGCTCTCGGCTGCTTTCCTCGAGTCAAAGTCATCCACACCTCGAAACTTATCTACGGTCAGATCTACATCCCGGAAATTAATTGGATACTTATGATCCTCACTCTTGCCATCACTATTGGATATCAAGACACAACTATGATCGGAAATGCTTACGGACTTGCTTGTATGACAGTCATGTTCATAACGACATTTCTCATGGCACTCGTCATAACGTTTGTCTGGCAGAAAAATGTTGCCTTGGCAGCAGCTTTTCTCGTATTTTTCTGGTTTGTCGAGGGCATTTACTTAGCGGCCGCATTTACGAAAGTTCCGCAAGGAGGATGGGTTCCCCTTGTGCTCTCCTTCATCTTTATGATCGTCATGTATATTTGGCATTACGGGACTTGTAAGAAATACAACTTCGATCTTCACAATAAAGTATCGCTCAAGTGGCTACTCGGCCTCGGTCCAAGCCTTGGCATCGTTCGAGTGCCTGGAATCGGTCTCATATACTCGGAATTGGCAACGGGAGTTCCCCCGATATTTTCCCACTTTGTGACGAATCTACCCGCATTTCATCAAGTGCTGGTTTTCGTATGTGTCAAATCGGTCCCTGTCCCATACGTCTCGCCGGAAGAACGGTTCCTCATCGGAAGGGTCTGCCCCCGACCGTATCGAATGTATCGTTGCATTGTGAGGTACGGGTACAAAGACATCCAAAGGGATGATGGGAATTTTGAGAATCAGCTCATTCAAAGCATAGCCGAGTTTATTCAAATGGAAGCCGCGGACCCACAGTTCTCTTGGTCTGAAAATTCGACTCCCGAAGGGAGGATGGCTGTCATAAGCACGAGAACTACTCAATCGGGACTGAGCCTGGTCATATCGGAGGTTGAAGATATCGACACGAGTAATTCAATCCGAAGCTGCAAATCTTTAACTCTTCAGAGTCTTCGAACCGTGTATGATGATGAGAACCCGCAGATCAGGAGGCGGGTGAGGTTTCAGTTGCCTGAAAACTTGGGTATAGATTCTGCCGTGATGGAAGAGTTGACGGATTTAATCGAGGCGAAAGAGGCTGGGGTGGCATACATTATGGGGCACTCGTATGTTAAAGCGAGAAGAAATTCATCGTTTTTGAAGAAAATTGTGATCAATATTGGCTATTCGTTTCTTCGAAAGAACTGCAGAGGTCATGCAGTAGCTCTCAACATTCCTCACATCAGTCTAATTGAAGTCGGTATGATATACTACGTATAG 2352 44.26 MEPESGFAAFRQPSKFSWTHVSRNLILAYQSFGVVYGDLSTSPLYVYKSTFVGKLEKHRNEETIFGAFSLIFWTLTLIPLLKYVFILLSADDNGEGGTFALYSLLCRHAKFNLLPNQQAADEELSAYKYGPSSHIVSSSPLKRFLEKHKTLRTALLLVVLFGACMVVGDGVLTPAISVLSSVSGLQFTEAKLHDGEIVLIACVILVGLFALQHYGTHKVAFGFAPIVIIWLLSIFSVGLYNTIRWNPKIVRAFSPYYVVKFFKRTGKDGFISLGGILLSITGTEAMFADLGHFTASSIRIAFGSVIYPCLVVQYMGQAAFLSKNLESIPNSFYDSIPDPVFWPVFVIATLAAIVGSQAVITATFSIIKQCHALGCFPRVKVIHTSKLIYGQIYIPEINWILMILTLAITIGYQDTTMIGNAYGLACMTVMFITTFLMALVITFVWQKNVALAAAFLVFFWFVEGIYLAAAFTKVPQGGWVPLVLSFIFMIVMYIWHYGTCKKYNFDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYSELATGVPPIFSHFVTNLPAFHQVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDIQRDDGNFENQLIQSIAEFIQMEAADPQFSWSENSTPEGRMAVISTRTTQSGLSLVISEVEDIDTSNSIRSCKSLTLQSLRTVYDDENPQIRRRVRFQLPENLGIDSAVMEELTDLIEAKEAGVAYIMGHSYVKARRNSSFLKKIVINIGYSFLRKNCRGHAVALNIPHISLIEVGMIYYV 783
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 15528790 15534238 + Bma001533.2 Bma01g01233 75750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g01233 783 TIGRFAM kup: potassium uptake protein 27 783 IPR003855 GO:0015079|GO:0016020|GO:0071805
Bma01g01233 783 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 20 783 IPR003855 GO:0015079|GO:0016020|GO:0071805
Bma01g01233 783 PANTHER POTASSIUM TRANSPORTER 4 20 783 - -
Bma01g01233 783 Pfam K+ potassium transporter 29 602 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01233 Bma-Chr1:15528790 Bma06g00444 Bma-Chr6:16977896 0 dispersed
Bma01g02656 Bma-Chr1:84059049 Bma01g01233 Bma-Chr1:15528790 0 dispersed
Bma05g00573 Bma-Chr5:33324806 Bma01g01233 Bma-Chr1:15528790 0 dispersed
Bma13g00046 Bma-Chr13:543463 Bma01g01233 Bma-Chr1:15528790 0 dispersed
Bma13g00047 Bma-Chr13:553761 Bma01g01233 Bma-Chr1:15528790 0 dispersed
Bma01g01233 Bma-Chr1:15528790 Bma06g00625 Bma-Chr6:33387765 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g01233 K03549 - tcc:18601159 1338.55