Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g01261 ATGGGGGAAGAAAAGAATGCGCAAGCGTCAGGAGAGGTCGTGGACGATGATTATTACGAGGAGCCCAAGAAAGGGTTTTGCAAATCTCTTTGCGTCCCAATCGACTGGCTTAAAATGCTGGCCACGGAAACGCATTGGAGCTTTGTGATTGGGGTTCTGATTGTTTATGGAATAAGCCAAGGATTAGGTGGAGCGCTTAATAAGGTGGGCACAGAGTATTACATGAAAGATGTTCAGAAGGTCCAGCCTTCTGAATCGCAAATTTACTCAGGAATTACTTCCCTTCCATGGATGGTGAAGCCTGTCTGGGGTCTCTTCACAGATGTTGTTCCTGTTCTTGGCTATCGCAGGCGGCCTTATTTTGTTTTAGCCGTCATCGGAACAGAACCTACCTCCAAAACTTCATATTCTCAAAACTTTCCCTTTTTTTTTCTCCAAATCGGGAAGCAGCGCATGATGCATAATAGCATAATGAGACGATTCTCATTTGATTCAACAAACACAGCAGCAGAAGCGACAGAGGGTGTCCATAAAATGGAACCTCAAAAACGAACGGAGGAGATTGTACAAACTCCAGGTGAAAGAAGCAGGGAAAGTTCGGCGATGGTTGTCTTTGAATCGAACCATCAAACTATGTGGAGCTACCTGATCCCTTTGATTCGTTTACAGATAACCAAAAGAAACACAGTCAAGTGCAAATCGAGTGTTAATAATCATACTAGAACATATTGGACGCCACCGATGGATCGTTATCTCATTGACTTGTTACTGGAACAGGTGCATAGAGGAAATAAACTTGGGCAAACATTTATAAGCCAGGCTTGGAATGAAATGGTTTCAGCTTTCAATGCGCAATTCAGATCTCACCATGATAAGGATGTTCTGAAGAATCGGTACAAGCATTTGAGAAGGTTGCATAATGATATAAATGTTCTTCTTCAGCAGAGAGGATTTTCATGGGATGAGACACGGGAAATTGTGACTGCTGATGAATATGTTTGGGATGATTATGCGAAGGAACACCATGATGCGCAATCATACAGAGTAAAAACGGTGCCAAGCTATCATAAATTGTGTGCTATATTTGGAGAAGAAAATTCTGAAGGAAGATATAGTCGTCTCGCACGGAATGTAGACCCTAGCAGCGTTGAAGGAACCGTTTTGATGACTGGTGGAAGAAGCGACCAATTCCCTACCTTAAATCCCTCACCGATTGATTGGAGTCTTTCAATGGACCGTTACTTCATCGATATAATGTTGGAGCAGCTGTATAGAGAGGATAAGATTGATGAAATATTTGATGAGCAGGCATGGAGTCACATGATCAATTCGTTTAACAAAAAATTTAAACTAACATGCGACAAATATGTTCTAGAGGATCGATATATGTGGATGATGAAGCAGCATAATGACATCTGCAATCTACTCAATTGTAGTGGGTTTGTGTGGGATGAAACTCAAGAAATGGTAATAGCTGAGGATGATGTATGGGAAGCTCACAAAAAGGTGATTTCTTCACATGCTGCATATCCTGATCTTGATGCCTCCACGTCATTCTTTGGTGTTTATGATGGTCATGGAGGTAAAGTAGTTGCCAAATTTTGTGCAAAGTATCTACACCAGCAAGTTCTGAAGAATGAAGCATATGCTGCAGGAGATACAAGAACTGCTTTACAACAAGCGTTTCTCAGGTTCGGCCCTCACTCTGATTTTACTGGTCCAAATTCCGGGTGCACGGCTTGTGTTTCAGTTATTAGAAACAACCAACTTCTTGTTGCAAATGCCGGTGACTCTCGTTGTGTGCTATCAAGGGCAGGCAAGGCTCAGAATATGTCTAAAGATCACAAACCTGATCTTGCGGTTGAGAAGGAAAGGATTTTAGAAGCTGGTGGATTTATCCATGCTGGAAGAGTCAATGGTTGCTTGAATCTCGCCAGAGCAATTGGTGATGCGGAATTCAAGCAAAATAAATTTTTGCCTGCCGAAATGCAAATCGTGACTGCCCATCCTGATGTTACCATGGCTGAGCTCAACAATGACGATGATTTTCTTGTGGTGGCATGTGATGGCATCTGGGAGTGTATGTCTAGTCAACAACTTGTGGAGTTTATACACGAACAACTAAGAACGGAAAGCAAGCTGTCTGTGGTGTGTGAAAGAGTACTGGACCGATGTTTAGCGCCAATGGCTGGTGGGGACGGATGTGATAACATGACCATGATCTTAGTGCAGTTGAAGAAACAACCAACCACAGGTGGAGCCGAACCATCTTCTCCCTCTACGTCCTCTGGGATAAGAAATTGTTAA 2307 42.74 MGEEKNAQASGEVVDDDYYEEPKKGFCKSLCVPIDWLKMLATETHWSFVIGVLIVYGISQGLGGALNKVGTEYYMKDVQKVQPSESQIYSGITSLPWMVKPVWGLFTDVVPVLGYRRRPYFVLAVIGTEPTSKTSYSQNFPFFFLQIGKQRMMHNSIMRRFSFDSTNTAAEATEGVHKMEPQKRTEEIVQTPGERSRESSAMVVFESNHQTMWSYLIPLIRLQITKRNTVKCKSSVNNHTRTYWTPPMDRYLIDLLLEQVHRGNKLGQTFISQAWNEMVSAFNAQFRSHHDKDVLKNRYKHLRRLHNDINVLLQQRGFSWDETREIVTADEYVWDDYAKEHHDAQSYRVKTVPSYHKLCAIFGEENSEGRYSRLARNVDPSSVEGTVLMTGGRSDQFPTLNPSPIDWSLSMDRYFIDIMLEQLYREDKIDEIFDEQAWSHMINSFNKKFKLTCDKYVLEDRYMWMMKQHNDICNLLNCSGFVWDETQEMVIAEDDVWEAHKKVISSHAAYPDLDASTSFFGVYDGHGGKVVAKFCAKYLHQQVLKNEAYAAGDTRTALQQAFLRFGPHSDFTGPNSGCTACVSVIRNNQLLVANAGDSRCVLSRAGKAQNMSKDHKPDLAVEKERILEAGGFIHAGRVNGCLNLARAIGDAEFKQNKFLPAEMQIVTAHPDVTMAELNNDDDFLVVACDGIWECMSSQQLVEFIHEQLRTESKLSVVCERVLDRCLAPMAGGDGCDNMTMILVQLKKQPTTGGAEPSSPSTSSGIRNC 768
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 17053757 17068190 + Bma001576.1 Bma01g01261 75778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g01261 768 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 401 502 - -
Bma01g01261 768 ProSitePatterns PPM-type phosphatase domain signature. 519 527 IPR000222 GO:0043169
Bma01g01261 768 CDD PP2Cc 506 745 IPR001932 -
Bma01g01261 768 SUPERFAMILY PP2C-like 507 747 IPR036457 -
Bma01g01261 768 Pfam Protein phosphatase 2C 500 729 IPR001932 -
Bma01g01261 768 PANTHER EXPRESSED PROTEIN 401 502 - -
Bma01g01261 768 SMART PP2C_4 466 743 IPR001932 -
Bma01g01261 768 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 212 381 - -
Bma01g01261 768 Pfam Myb/SANT-like DNA-binding domain 407 500 IPR024752 -
Bma01g01261 768 Pfam Myb/SANT-like DNA-binding domain 243 337 IPR024752 -
Bma01g01261 768 Gene3D - 485 746 IPR036457 -
Bma01g01261 768 PANTHER EXPRESSED PROTEIN 212 381 - -
Bma01g01261 768 Pfam BT1 family 60 127 IPR039309 -
Bma01g01261 768 ProSiteProfiles PPM-type phosphatase domain profile. 488 745 IPR001932 -
Bma01g01261 768 MobiDBLite consensus disorder prediction 748 768 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01261 Bma-Chr1:17053757 Bma04g00294 Bma-Chr4:2356598 1.97E-36 dispersed
Bma03g00164 Bma-Chr3:1260619 Bma01g01261 Bma-Chr1:17053757 5.64E-15 transposed
Bma03g00953 Bma-Chr3:10142379 Bma01g01261 Bma-Chr1:17053757 1.52E-14 transposed
Bma05g00289 Bma-Chr5:8326531 Bma01g01261 Bma-Chr1:17053757 1.48E-26 transposed
Bma05g01105 Bma-Chr5:49819280 Bma01g01261 Bma-Chr1:17053757 8.12E-14 transposed
Bma13g00652 Bma-Chr13:16077055 Bma01g01261 Bma-Chr1:17053757 3.37E-21 transposed
Bma15g00507 Bma-Chr15:5909548 Bma01g01261 Bma-Chr1:17053757 5.72E-37 transposed
Bma10g01306 Bma-Chr10:46439350 Bma01g01261 Bma-Chr1:17053757 2.30E-25 transposed
Bma01g01261 Bma-Chr1:17053757 Bma04g00097 Bma-Chr4:786381 1.15E-128 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g01261 K17499 - ming:122066656 392.119