Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g01283 ATGCAAGAACAAGCCACCAGTTCAGTCGCTGCCAGTTCTTTGCCGTCCAGCAGTGAAAGATCGTCGAGCTCTGCTCTTCAGCTTGACATTTTCGTTATATGGGAATCAGGTATGGAAAGCGACGAGGAGATCAGGAGAGTACCGGAGTTGGGCGGTGAATCAGCGGGAACTTCAGCATCCAGAAGAGATACTGGTTCTGCGGCAGGTTCTGAGCTGGCAAGAGTCGCAAGGGAAGGTCAAAGGAAGAGGGGAAGAAGCCCAGCTGACAAGGAGAGCAAAAGGCTCAAAAGATTGTTGAGAAACAGAGTTTCAGCACAGCAAGCAAGGGAAAGGAAGAAGGCATACTTAAGTGACCTGGAAACGCGGGTAAAAGAGTTGGAGAAGAAGAACTCGGAGCAAGAAGAGAGACTCTCCACTCTGCAGAATGAGAACCAGATGCTTAGACAGGTATTACGATCTGAATCATCATTTCTTGCCGCCATCGTTGAATTAGCTCAGTTTCCGGATTCACCTGAGATTCGAGCAGAATTTGACTGTCATGCTCCATTTTTTCCTCTTGGATGTTTGTTTTCGTCCTACAGATTTTAA 588 47.45 MQEQATSSVAASSLPSSSERSSSSALQLDIFVIWESGMESDEEIRRVPELGGESAGTSASRRDTGSAAGSELARVAREGQRKRGRSPADKESKRLKRLLRNRVSAQQARERKKAYLSDLETRVKELEKKNSEQEERLSTLQNENQMLRQVLRSESSFLAAIVELAQFPDSPEIRAEFDCHAPFFPLGCLFSSYRF 195
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 17321138 17322134 - Bma001598.1 Bma01g01283 75800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g01283 195 CDD bZIP_HY5-like 94 145 - -
Bma01g01283 195 Pfam bZIP transcription factor 90 149 IPR004827 GO:0003700|GO:0006355
Bma01g01283 195 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 91 154 IPR004827 GO:0003700|GO:0006355
Bma01g01283 195 SMART brlzneu 89 153 IPR004827 GO:0003700|GO:0006355
Bma01g01283 195 MobiDBLite consensus disorder prediction 40 111 - -
Bma01g01283 195 Coils Coil 88 150 - -
Bma01g01283 195 SUPERFAMILY Leucine zipper domain 93 151 IPR046347 GO:0003700|GO:0006355
Bma01g01283 195 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 1 153 IPR044280 GO:0000981|GO:0045944
Bma01g01283 195 MobiDBLite consensus disorder prediction 1 24 - -
Bma01g01283 195 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 96 111 IPR004827 GO:0003700|GO:0006355
Bma01g01283 195 MobiDBLite consensus disorder prediction 75 111 - -
Bma01g01283 195 Gene3D Single helix bin 112 152 - -
Bma01g01283 195 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 1 153 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g01283 Bma02g00029 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01283 Bma-Chr1:17321138 Bma04g01706 Bma-Chr4:53280979 2.33E-06 dispersed
Bma01g02698 Bma-Chr1:84427727 Bma01g01283 Bma-Chr1:17321138 5.50E-08 transposed
Bma01g01283 Bma-Chr1:17321138 Bma02g00029 Bma-Chr2:322327 8.19E-71 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56719 PF00170 bZIP_1 1.50E-12 CL0018 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g01283 K16241 - csv:101218051 216.083