Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g01319 ATGTGGTTGGAGAAAAACAATTTGGAAAGAAAAGACGGAGGCACTGGATTGGTAGCCATAGCCATCGACAAGGACAAAGGCAGCCAAAACGCTCTAAAATGGGCGACTGATAATATCCTCCAGAGAGGCCAAACCGCCATTCTCATCCACGTGAAGCTCAAACCCCCACCAGCTCCCAACCCCCCACTTTTCATGCCCGCAACTGATGCAGACAAAGACGATTTACCATCCTCGAAAGAGACAGATTCTGCCATCAAGGATTTGTTTCTTCCCTTTCGTTGTTTTTGCACTCGTAAGGACATTCAATGCAAAGACGTTGTCCTAGAAGATGTGGATGTAGCCAAGGCATTGGTAGAATATGTCGGTCGTGCAGGCATTGAGAATTTGGTCGTTGGAGCCACGACCAAAGGTGGCTTCCTAAGGCATGTCTTCCATCTTGTACAATACCCTTTCTCAACAGACATTCCAGCCAATGTGTTGAAAGGATCGCCGGAGTTCTGCAATGTCTTCGTCATATCAAAGGGGAAAGTTCAATCCACGCGCCTGGCCTCCCGCCCTGCTCCTCCTCGCTCTCCTCTCCTCGATCAGTTCTTAAACCAAACCAGTCTCAGATCAGATTCATCTGACAATGCAAACCCAGGTCAGAGTTTTCAAAATTCTTCGCTCACCCGTTGCTTACTATTCAAATTGATTTGTACCTTCTCAGGATCGGAAAAACCCCCCGTCGATACGCCGCGTCAATCTCAAGACAAGTCCGAATTCTTCAGGAATCTAAATTTGAGAATTGTTCATGGAAGTAGATCTCCGTTCGGTCGAAGAGGGCATAACGGGAAATCATACGGCGAAATCTCGTTGCCCGATACAGATATTTCTTACGTGAGCTCCGGGAGGTCGAGTTTTGACCGTTTAACCCCTCCGTTCTACGACAATCAAGATCTGGGAAGGGCTACTCCACGGTTGTCGAGCAGCACAGAATCGGATGTGAGTCACGGCAGCTTCGAGTCGCTGCAATTAGGACGGAGGTCAGTCGATAGTTTTTCGCAGCTTTCTACTGAAAGTGAGGGCCTATCGAACGGATCGCAGTCTATGGAAGAAGTGGAGGCTGAGATGAGGAGGCTGAAGCTTGAACTGAAGCAAACTATGGCAATGTATAGCACCGCCTGCAAGGAAGCACTCACAGCAAAACGAACGGCGATAGAGCTGCAACGCTGGAAAGTGGAAGAAGAGCGCAAACTAGAAGAAGCTCGACTAGCAGAGGAAGCTGCATTGGCAGTTGCAGAACTTGAAAAGGCTAAGTCTAGAGCGGCCATGGAGGCAGCCGATGCAGCTAGAAGAATTGCAGAGCTGGAAGCTCAGAAAAGAATAAACGCAGAGATGAAAGCCATGAAGGAATCAGAGGAGAAGAAGAAGGCCCTTTATGCTCTTGCAAATACAGACATCAGGTATAGAAAATATTCGATCGAAGAGATCGAATCTGCGACTGAGTTCTTCACCGAGTCGCTCAAGATCGGAGAAGGAGGTTACGGGCCTGTTTATAAATGTTTTCTGGATCATACTCCAGTTGCAATCAAGGTTCTTCGCCCAGACGCGTCTCAAGGAAGATCACAGTTTCAGAAAGAAGTTGAAGTCCTCAGCTGCATACGCCATCCTAACATGGTTCTTCTCCTCGGAGCCTGTCCGGAGTACGGTTGCTTAGTCTACGAATATATGGACAACGGAAGCTTGGATGATCGTCTGTTTCGGAGAGGGAATACTGCACCTCTTTCTTGGCAGACCAGATTCAGAATCGCCGCCGAAATTGCCACCGGATTGCTGTTTCTCCACCAGACAAAACCGGAGCCGCTTGTCCACCGTGACCTCAAACCGGGTAACATTTTGCTCTGCCGAAACTTCGTCAGCAAGATCAGCGACGTCGGATTGGCCCGACTGGTCCCACCATCGGTGGTAGATAATGTAACTCAGTATCGAATGACGTCGACGGCGGGGACGTTCTGTTATATCGATCCGGAGTATCAACAAACCGGCATGCTTGGGGTTAAATCCGACGTTTATTCTCTGGGAATCATGCTTCTGCAAATGGTTACGGCTAGACCACCTATGGGTTTGACTCACCACGTCGGAAGGGCAATAGAGAAAGGCCGGTTTGCCGACATGCTAGACCCTGCCGTGCCTGACTGGCCGGTCGAACACGCTCTTTCCTTCGCCAAGCTGGCTCTGAAATGCTCCGAGCTGAGACGAAAAGACCGGCCGGATCTCGGCAAGGAAATCCTGCCGGAACTGAACAGGCTCAGAATGCTAGGCGAAGATACAATACATCCGTCTGTAGGCGGCAGTGCAAATCCCTCCCCCAACCACAGTCAGATTTCCATGCAGCTAGTATGTAAAAATACATCATTTTGA 2400 49.29 MWLEKNNLERKDGGTGLVAIAIDKDKGSQNALKWATDNILQRGQTAILIHVKLKPPPAPNPPLFMPATDADKDDLPSSKETDSAIKDLFLPFRCFCTRKDIQCKDVVLEDVDVAKALVEYVGRAGIENLVVGATTKGGFLRHVFHLVQYPFSTDIPANVLKGSPEFCNVFVISKGKVQSTRLASRPAPPRSPLLDQFLNQTSLRSDSSDNANPGQSFQNSSLTRCLLFKLICTFSGSEKPPVDTPRQSQDKSEFFRNLNLRIVHGSRSPFGRRGHNGKSYGEISLPDTDISYVSSGRSSFDRLTPPFYDNQDLGRATPRLSSSTESDVSHGSFESLQLGRRSVDSFSQLSTESEGLSNGSQSMEEVEAEMRRLKLELKQTMAMYSTACKEALTAKRTAIELQRWKVEEERKLEEARLAEEAALAVAELEKAKSRAAMEAADAARRIAELEAQKRINAEMKAMKESEEKKKALYALANTDIRYRKYSIEEIESATEFFTESLKIGEGGYGPVYKCFLDHTPVAIKVLRPDASQGRSQFQKEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMDNGSLDDRLFRRGNTAPLSWQTRFRIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLCRNFVSKISDVGLARLVPPSVVDNVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDVYSLGIMLLQMVTARPPMGLTHHVGRAIEKGRFADMLDPAVPDWPVEHALSFAKLALKCSELRRKDRPDLGKEILPELNRLRMLGEDTIHPSVGGSANPSPNHSQISMQLVCKNTSF 799
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 18093973 18097250 - Bma001639.1 Bma01g01319 75836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g01319 799 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 34-LIKE 10 793 - -
Bma01g01319 799 Gene3D Phosphorylase Kinase; domain 1 476 569 - -
Bma01g01319 799 MobiDBLite consensus disorder prediction 315 334 - -
Bma01g01319 799 Coils Coil 356 383 - -
Bma01g01319 799 Gene3D Transferase(Phosphotransferase) domain 1 570 771 - -
Bma01g01319 799 SUPERFAMILY Protein kinase-like (PK-like) 478 752 IPR011009 -
Bma01g01319 799 Pfam Universal stress protein family 19 144 IPR006016 -
Bma01g01319 799 ProSitePatterns Serine/Threonine protein kinases active-site signature. 615 627 IPR008271 GO:0004672|GO:0006468
Bma01g01319 799 Pfam Protein kinase domain 498 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g01319 799 SMART serkin_6 497 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g01319 799 Coils Coil 414 469 - -
Bma01g01319 799 CDD STK_N 17 175 - -
Bma01g01319 799 MobiDBLite consensus disorder prediction 266 286 - -
Bma01g01319 799 MobiDBLite consensus disorder prediction 303 334 - -
Bma01g01319 799 Gene3D HUPs 17 171 IPR014729 -
Bma01g01319 799 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 19 144 - -
Bma01g01319 799 MobiDBLite consensus disorder prediction 60 79 - -
Bma01g01319 799 PANTHER OS02G0152300 PROTEIN 10 793 - -
Bma01g01319 799 ProSiteProfiles Protein kinase domain profile. 497 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01319 Bma-Chr1:18093973 Bma07g00657 Bma-Chr7:11006423 0 dispersed
Bma01g01319 Bma-Chr1:18093973 Bma02g00064 Bma-Chr2:512939 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66280 PF00069 Pkinase 4.10E-39 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g01319 - - tcc:18587557 969.148