Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma01g01375 | ATGGTACCGGGAGGAGGAAGTGGGACTTCTATTCTAAAATCTGCTACCCTGATATTGACTAGGGCATTAGAGCCATTAGTCCTACCTTCAGACGTCAGCCAAGCTATTAAACAGCGACTTCTTTATTTTGTGAAATCATTGTCAACAATGCTTGCGTTTGCCTATTGTCTATCGAGCTTGATTCAACAGGCACAAAAGTTCTTCATTGAAACAAATGATTCTGGTGAAGCAAGAAATATGGGTTTCGATTTTGCTGGGAAAACTGTTTATACAGCAGTATGGGTTGCTGCTTTATCACTGTTCATGGAGTTGCTTGGTTTTTCTACGCAAAAGTGGCTGACTGCTGGGGGTCTTGGTACAGTATTACTCACCCTTGCGGGTCGTGAGATTTTGACAAATTTCCTTTCAAGCATAATGATTCATGCCACGAGGCCATTTGTTTTGAATGAGTGGATTCAAACAAAGATTGACGGCTATGAAGTTTCTGGCACTGTAGAGCATGTGGGTTGGTGGTCTCCAACAATTATCAGAGGCGATGATCGAGAAGCAGTTCATATCCCAAATCACAAGTTCACTGTTAATGTTGTGAGGAATCTTAGCCAGAAGACTCATTGGCGTATCAAGTCCCATCTTGCCATCAGCCACTTTGACATCAATAAAATCAATAATGTTGTAGCTGACATGCGCAAAGTTTTAGCGAAAAATCCTCAAATTGAGCAGCAAAGGTTACACAGAAGAGTTTTTCTGGATTATATTGATCCTGAAAATCAAGCTCTTATGGTTCTAGTTTCGTGCTTTGTGAAAACCTCTCATTTTGAAGAGTACCTATGCGTCAAGGAAGCAATTCTCTTAGATCTTCTCCGAGTCATCAGCCATCACCGCGCCAGGCTTGCTACTCCCATTCGCACAGTTCAAAAAAGTTACAGAGGGGCTGACTTGGATGTATCTTTTTTTGCTGATACCATCATCTCGCAATCTACGGCAGCTAATGATGGTCCTCTCCTACTCATTGAACCGTCACGTAAGATGAGCAGTGATGACAAAGTGAAGACCTTCCCTCGATCCACGAGTTCAGACGAAGAAAAAGAAGCCGAGCAAGAAGCAGCATCCACAACTGATATGAATGCCTCCGACAAGGCTGGATCGTCATCAAATCATGAAGCCGAAAAAGACGATAGAAGTGCAGAAAAGCCATCGGAGACTCAGACCCAGAACCCACGCCCTGATACTTCAGAGAGAATTCCTGAAATGCCAGTGGCGAAGAACGGAGCGAGAGAAAAAGAGGATGAGAGTATGGTGATCAAGTCCATCAACACTACCCCTAAAGGAGTGACATCGGAGAAGTCCTGGGCTGTTTTGCCGGCATCAGACAGTGAAGAAATGGCATCTATTAGTGTGCGTATGAAGGAAGATGGCGAAAAGGGTACTGTGTCGACTGCAATATCATTGCCTCCATTGGAAGAGAACATACTTCTAGGTATTGCTTTGGAAGGGTCGAAAAGAACACTTCCAATCGAGGAAGAAACTCCTTCAATGTTTGAATCAAGAGAAATATCTGCCCATCAAACTCCACGTTCCCAAATTAGCACGGAAGCTAAAGACGCTCAGGTACCAGCAGTTCCTGGTGCGACCCAAAATGCTTAA | 1644 | 43.8 | MVPGGGSGTSILKSATLILTRALEPLVLPSDVSQAIKQRLLYFVKSLSTMLAFAYCLSSLIQQAQKFFIETNDSGEARNMGFDFAGKTVYTAVWVAALSLFMELLGFSTQKWLTAGGLGTVLLTLAGREILTNFLSSIMIHATRPFVLNEWIQTKIDGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVNVVRNLSQKTHWRIKSHLAISHFDINKINNVVADMRKVLAKNPQIEQQRLHRRVFLDYIDPENQALMVLVSCFVKTSHFEEYLCVKEAILLDLLRVISHHRARLATPIRTVQKSYRGADLDVSFFADTIISQSTAANDGPLLLIEPSRKMSSDDKVKTFPRSTSSDEEKEAEQEAASTTDMNASDKAGSSSNHEAEKDDRSAEKPSETQTQNPRPDTSERIPEMPVAKNGAREKEDESMVIKSINTTPKGVTSEKSWAVLPASDSEEMASISVRMKEDGEKGTVSTAISLPPLEENILLGIALEGSKRTLPIEEETPSMFESREISAHQTPRSQISTEAKDAQVPAVPGATQNA | 547 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 21321220 | 21326215 | - | Bma001715.1 | Bma01g01375 | 75892 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma01g01375 | 547 | MobiDBLite | consensus disorder prediction | 514 | 547 | - | - | |
Bma01g01375 | 547 | SUPERFAMILY | Sm-like ribonucleoproteins | 130 | 200 | IPR010920 | - | |
Bma01g01375 | 547 | Pfam | Mechanosensitive ion channel | 87 | 294 | IPR006685 | GO:0016020|GO:0055085 | |
Bma01g01375 | 547 | Gene3D | - | 39 | 144 | - | - | |
Bma01g01375 | 547 | MobiDBLite | consensus disorder prediction | 341 | 368 | - | - | |
Bma01g01375 | 547 | PANTHER | MECHANOSENSITIVE ION CHANNEL PROTEIN 2, CHLOROPLASTIC | 14 | 537 | - | - | |
Bma01g01375 | 547 | MobiDBLite | consensus disorder prediction | 419 | 433 | - | - | |
Bma01g01375 | 547 | MobiDBLite | consensus disorder prediction | 515 | 533 | - | - | |
Bma01g01375 | 547 | MobiDBLite | consensus disorder prediction | 383 | 398 | - | - | |
Bma01g01375 | 547 | MobiDBLite | consensus disorder prediction | 338 | 451 | - | - | |
Bma01g01375 | 547 | Gene3D | - | 146 | 201 | IPR023408 | - | |
Bma01g01375 | 547 | PANTHER | OW CONDUCTANCE MECHANOSENSITIVE CHANNEL | 14 | 537 | IPR045042 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g01375 | Bma-Chr1:21321220 | Bma02g00115 | Bma-Chr2:1054805 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma01g01375 | K22047 | - | csv:101213477 | 669.077 |