Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g01433 ATGTCTAAAGCTTCTTCTTCTCTGCTCTTCATTTCTTCCCTTCTCTTTCTCTCAGCCTGTGTTTGCTTTGCTGATAGCAGGCCTTCTGTCCCTCTCGTCAGCGGCCTCAAATGGAACTTCTACAAGTCCACCTGCCCTAGTCTCGAGTCCCTCGTCCGAAAAGAACTCAAGAAGATCTTCCGCCACGACATCGGCCAAGCTGCCGGCTTGCTTCGCCTCCATTTCCACGACTGCTTTGTTCAGGGGTGCGAAGGCTCGGTTCTGCTCGAGGGGTCGACGTCCGGACCGGGCGAGCAGGATGCACCTCCGAACCTGAGTTTGAGAGAACGAGCTTTTGAGATCATCAATGAGCTGAGAGAGATTGTCCACAACAAGTGTGGACGAATCGTCTCCTGCTCTGATATTCTTGCTCTTGCAGCTCGTGACTCCATTGATCTGTCTGGAGGACCTCACTATGAAGTACCGTTGGGAAGAAGAGATGGACTGAACTTCGCCACGAGAGAAGCAACCCTAGCTAATCTTCCTCCCCCGTCCAGCAACGCCAGCGCCCTTCTCTCCAGCCTCTCCTCCAAAGGCTTCGACGCCACCGACGTTGTCGCCCTCTCCGGCGGCCACACCATCGGAATCGGCCACTGTCCCGCCTTCACTGCTCGCCTCTACCCGACCCAAGATCCAACCATGGACGAAGAGTTTGCCGCCGATCTCAAAACCATCTGCCCCACCCCCACCACCAACAGTTCCACCTTCCTCGACGTCCGAACTCCCAACCACTTCGACAACAAATACTACGTCGATCTCGTCAATCGTCAAGGGCTCTTCACTTCCGATCAGGATCTATACTTCAACAGTGAAACGAGAGACATTGTCACAAGCTTCGCCAAAGATCAGGATCTGTTCTTTGATAAGTTGGTGGATTCAATGACGAAGATGGGCCAGTTGAGCGTGTTGACCGGAAGAGCAGGGGAGATCAGGGCAAACTGCTCAGTCAGAAACTCCGACAATACTCACCTGGTAATCGAGGAGACAATAGTTGAAGAACTCGAAGAGTTGGAGAGCTACTCTGAGCTCTAA 1071 53.13 MSKASSSLLFISSLLFLSACVCFADSRPSVPLVSGLKWNFYKSTCPSLESLVRKELKKIFRHDIGQAAGLLRLHFHDCFVQGCEGSVLLEGSTSGPGEQDAPPNLSLRERAFEIINELREIVHNKCGRIVSCSDILALAARDSIDLSGGPHYEVPLGRRDGLNFATREATLANLPPPSSNASALLSSLSSKGFDATDVVALSGGHTIGIGHCPAFTARLYPTQDPTMDEEFAADLKTICPTPTTNSSTFLDVRTPNHFDNKYYVDLVNRQGLFTSDQDLYFNSETRDIVTSFAKDQDLFFDKLVDSMTKMGQLSVLTGRAGEIRANCSVRNSDNTHLVIEETIVEELEELESYSEL 356
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 24364086 24365383 - Bma001805.1 Bma01g01433 75950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g01433 356 PRINTS Plant peroxidase signature 129 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma01g01433 356 PRINTS Plant peroxidase signature 110 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma01g01433 356 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma01g01433 356 PRINTS Plant peroxidase signature 196 208 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma01g01433 356 PRINTS Plant peroxidase signature 69 89 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma01g01433 356 PRINTS Plant peroxidase signature 265 282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma01g01433 356 PRINTS Plant peroxidase signature 148 163 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma01g01433 356 PRINTS Plant peroxidase signature 249 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma01g01433 356 PRINTS Plant peroxidase signature 45 64 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma01g01433 356 SUPERFAMILY Heme-dependent peroxidases 31 333 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bma01g01433 356 CDD secretory_peroxidase 35 329 IPR033905 GO:0004601|GO:0042744
Bma01g01433 356 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Bma01g01433 356 PANTHER PEROXIDASE 24 334 - -
Bma01g01433 356 ProSitePatterns Peroxidases proximal heme-ligand signature. 197 207 IPR019793 -
Bma01g01433 356 ProSitePatterns Peroxidases active site signature. 67 78 IPR019794 GO:0004601
Bma01g01433 356 PANTHER PEROXIDASE 25-RELATED 24 334 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma01g01433 356 PRINTS Haem peroxidase superfamily signature 130 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma01g01433 356 PRINTS Haem peroxidase superfamily signature 148 160 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma01g01433 356 PRINTS Haem peroxidase superfamily signature 67 81 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma01g01433 356 PRINTS Haem peroxidase superfamily signature 197 212 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma01g01433 356 PRINTS Haem peroxidase superfamily signature 251 266 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma01g01433 356 Pfam Peroxidase 52 295 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma01g01433 356 Gene3D Peroxidase, domain 2 176 311 - -
Bma01g01433 356 ProSiteProfiles Plant heme peroxidase family profile. 35 331 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma01g01433 356 Gene3D - 39 328 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00558 Bma-Chr1:4896111 Bma01g01433 Bma-Chr1:24364086 4.43E-73 dispersed
Bma01g01433 Bma-Chr1:24364086 Bma09g00813 Bma-Chr9:46862751 4.79E-86 dispersed
Bma01g01433 Bma-Chr1:24364086 Bma07g00045 Bma-Chr7:1368583 1.23E-81 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g01433 K00430 - jre:109010267 474.552