Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g01479 ATGGTCGTGGAAGAGGCAGTCAATTCTGCCGGCAACGAGGACGAGATCATCGCCGTACCTAGGGCTCGAGGCAGTGATGAAGAAGATGGGGAGCTGGAGGAGGGAGAGATTGTAGGAGACGCAGACTCAACGTCATCAAAGCAATCTGCGGGTTTAGTTTACCATCTGCACCCTCTTGAGCATTCTTGGACTTTTTGGTTTGATAGCCCTTCTGCTAAAAACAAGCAGGCTGCTTGGGGTAGCTCTATTCGCCCGATCTACACTCTCGCTACTGTTGAGGAGTTCTGGGGTGTCTACAATAATATTCATCGTCCTAGCAAGTTAGCAGTTAGAGCAGACTTGTATTGTTTCAAATATAACATTGAACCAAAGTGGGAGGACCCTGTTTGTGCCAATGGAGGAAAATGGACTGTAAGCTACCAAAGAGGGAAATCCGATAACGGTTGGCTGTTTACGTTGCTTGATATGATTGGGGAACAGTTTGATCATGGTGATGAAATTTGTGGAGTTGTGGTTAATGTTCGACCCAAAGAGGAAAAGGTATCTCTTTGGACCAAGAATGCTTCTAACAAAGATGCTCAGATTAGCATTGGGAAACAATGGAAGGAGTTCCTTGATTACAACGACAGCATAGGATTCATAGTCCACGACGATGCTATGAAATATGACAGAAGCGCGAAGAATCGGTACACAATATGA 699 45.35 MVVEEAVNSAGNEDEIIAVPRARGSDEEDGELEEGEIVGDADSTSSKQSAGLVYHLHPLEHSWTFWFDSPSAKNKQAAWGSSIRPIYTLATVEEFWGVYNNIHRPSKLAVRADLYCFKYNIEPKWEDPVCANGGKWTVSYQRGKSDNGWLFTLLDMIGEQFDHGDEICGVVVNVRPKEEKVSLWTKNASNKDAQISIGKQWKEFLDYNDSIGFIVHDDAMKYDRSAKNRYTI 232
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 28350010 28352665 - Bma001881.1 Bma01g01479 75996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g01479 232 ProSitePatterns Eukaryotic initiation factor 4E signature. 113 136 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Bma01g01479 232 MobiDBLite consensus disorder prediction 1 44 - -
Bma01g01479 232 Pfam Eukaryotic initiation factor 4E 58 209 IPR001040 GO:0003723|GO:0003743|GO:0006413
Bma01g01479 232 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 1 232 IPR001040 GO:0003723|GO:0003743|GO:0006413
Bma01g01479 232 SUPERFAMILY eIF4e-like 53 229 IPR023398 -
Bma01g01479 232 Gene3D RNA Cap, Translation Initiation Factor Eif4e 51 232 IPR023398 -
Bma01g01479 232 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E-1 1 232 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g01479 Bma14g00957 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g01670 Bma-Chr4:52510223 Bma01g01479 Bma-Chr1:28350010 2.65E-24 transposed
Bma05g01251 Bma-Chr5:51846463 Bma01g01479 Bma-Chr1:28350010 3.98E-68 transposed
Bma01g01479 Bma-Chr1:28350010 Bma14g00957 Bma-Chr14:10931089 4.98E-86 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g01479 K03259 - csv:101206312 351.673