Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g01498 ATGTTTTTCTTCAAAAATTCCGTTCCTTTAAATGCTTCTAAATCCCCATTTTATCAAGAAATGGTGAACGCCATTGCAGACTATGGAGTTGGATACAAAGCTCCAACTTATGAAAAATTGAAATCGTCTCTTTTGTATAGAGTTAAAGGCGATATACACGAGTCTTGTAAGAAATATCGAGCCAAATGGAAAGAAACAGGTTGCACAATCTTGTGCGATAACTGGTCCGATGGTAAAACAAAATCATATGTAGTAGTTTCAGTAACATGTCTGAATGGTGCGCTCTTTTTAAAGTCAGTTGATGTGACAGAGCATGATAAGGATGCCAATTATTTGTTCGAATTGCTTGAGAATATTGTGCTAGACATTGGATTGGAAAACGTTGTTCAAGTTATAACTGATACGACTGCAAGTTTTGTATATGCAGGAACACTTCTTATGGCCAAATACAACTCGGTATTTTGGTCTCCTTGTGCTTCTTACTGCATTGATAAGATGTTGGAGGATATCGGCAAACAGGAATGGGTCAGAACGGTACTAGAGGAGGCAAAGAACATTAGTCTATACATATATAGTCATGCTTGGACATTAAATATGATGAGAAAGTTTACTGGTGAAACAGAGTTGACTAGGCCCGGAATTACAAGATTTGTAACTAATTTTCTCTCCTTGAGGTCTATTGTTCTTCAGGAAGGTAATCTAAAGCACATGTTCTCTCATTCTGAGTGGTCATCGTCAATTTACAGTAGAAACTCCGATGCTCAAGCTATTAAGTCGTTGGTACATTTGGAGAGATTTTGGAAGTATGCACACGAGGCTGTCAGCATTTCCGAACCACTCATTACAATACTGAGAATAGTTGACGGAGACATGCCTGATATGGGATATATTTATGATGATATAGAGAAGGCAAAGAATAAAATCAAGCTACATTACAAGGGTATTGAGGAGAATTATATGCCAATTTGGGATATAATAGATCAAAGATGGAGTATGCAGCTTCGCTCATCGTTGCATGCAACCGCAGCATTTCTCAACCCATCTATTTTCTATGGTTCTGATATTAAGACTGATTTGAGGGTGAGAAATGGATTTCAAGAAACCATATCAAAGATGGTTGCCACAGATAAAGATAAAATAGAAATTGCCAAAGAACACCCTATTTATATTAATGGACAAGATGCTCTAGGAACTGAATTTTCCATCATGGGGAGGACATTGAATGCCACAGATATTGTTGGTCTCCAAAATGAAGATGGGTCCTTGTCAGGGGACATTTGGGGTGAGATTGATACAAGGTTTTCATATATTGCTATATGTTGTCTTTCATTATTACGTCAATTGGACAAAATTAATGTCAAGAAGGCTATAAATTACATAGTTAGTTGCAAAAACTTTGACGCCGGATTCGGAAGCACTCCCGGGGTAGAGTTCATGCCGAACAGAGTATTTTTTTGTTGTGTTGCTGCTCTTGCAATAACTGGATCTTTGCATCATATTGACAAAGATCTTCTTGGTTGTTGGCTTTGCGAAAGACAAGTTAAATCTGGAGGGCTTAACGGTCGTACTCAAAATCTTTCATTTGCTCCCTCATACAGTTTGTTTGACTCCTTCAGGTTTGCTGTTCTTTCTAGCTCGATCATGATCAACAGAGCTCACTGGATCAGTAAAGAAAAGCTCATTCAATTTAGTTTTCAAATAAAACCAAAGTCACTTGTTCGAATGCTATGTCCACCCATTTTCTCAGAAATACAAGGACCACATGCCCCTAAAGATAATGCCCAAACTAGTTTCGTGTCTTTTTATGGTTTAAAGATTCTCCTCACAAAAGTAAGTTTTAAAGTCTTCTCCAATTCTCTTCTGGCTTTCTTCCTCGTTCTCACAACCACCATGGAACCTGTATCAAGCTTCATACAGAATCTTGCCAACATCGTGAAACCTTTCTGCTCATTCTTCTTCTCTCGCAACTGGGTTGACAGCGATTATACCTATTGGCGAGAGTATTCCATAATTGCTGCAATTTTTTCTGCTCTTGCATTTTCATGGCTATTGTTGCAGTCGAAGAAGAAGAGTCTGAAATTACCACCTGGCCCTCGTGGAGTACCCTTGCTCGGAAACCTCCCTTTTCTTGACCCGGAGCTTCACTCCTACTTCGCCGATCTGGCTCGAGTCTACGGTCCGATCATGAAACTCCGGCTCGGCAACAAGTTGGCCATAATTCTGAGCACTCCGGACATGGCTCGAGAAGTTCTTAAGGATCAGGACGTCACCTTCGCCAACCGTGACGTTCCAACCGTTGTTCTCACCGCGACCTACGGCGGCTTGGATATTGCATGGACACCATACGGGCCAGAGTGGAGAATGTTGAGAAAAGTCTGCGCTCTCAAAATGCTCAGCAACCCCACGTTAGACTCCGTCTATAAGCTCCGGCGAAAGGAGATCCGAGACAGAGTGGGTCACTTCTACAACCGTGCCGGATCCCTGGTGAACGTCGGCGAGCAGACGTTTTTGACCATTCTGAACGTCATTACCTCTATGATGTGGGGGGGTACCGTGAGGGGGAAAGAGAGGGCTACCATCGGAGCGGAGTGTAGACAGCTTGTATCGGACATGACCGAATTATTCGGGAAACCCAACATTTCCGACTTTTTATCCTGGATTATCTCGGTTTGA 2673 41.49 MFFFKNSVPLNASKSPFYQEMVNAIADYGVGYKAPTYEKLKSSLLYRVKGDIHESCKKYRAKWKETGCTILCDNWSDGKTKSYVVVSVTCLNGALFLKSVDVTEHDKDANYLFELLENIVLDIGLENVVQVITDTTASFVYAGTLLMAKYNSVFWSPCASYCIDKMLEDIGKQEWVRTVLEEAKNISLYIYSHAWTLNMMRKFTGETELTRPGITRFVTNFLSLRSIVLQEGNLKHMFSHSEWSSSIYSRNSDAQAIKSLVHLERFWKYAHEAVSISEPLITILRIVDGDMPDMGYIYDDIEKAKNKIKLHYKGIEENYMPIWDIIDQRWSMQLRSSLHATAAFLNPSIFYGSDIKTDLRVRNGFQETISKMVATDKDKIEIAKEHPIYINGQDALGTEFSIMGRTLNATDIVGLQNEDGSLSGDIWGEIDTRFSYIAICCLSLLRQLDKINVKKAINYIVSCKNFDAGFGSTPGVEFMPNRVFFCCVAALAITGSLHHIDKDLLGCWLCERQVKSGGLNGRTQNLSFAPSYSLFDSFRFAVLSSSIMINRAHWISKEKLIQFSFQIKPKSLVRMLCPPIFSEIQGPHAPKDNAQTSFVSFYGLKILLTKVSFKVFSNSLLAFFLVLTTTMEPVSSFIQNLANIVKPFCSFFFSRNWVDSDYTYWREYSIIAAIFSALAFSWLLLQSKKKSLKLPPGPRGVPLLGNLPFLDPELHSYFADLARVYGPIMKLRLGNKLAIILSTPDMAREVLKDQDVTFANRDVPTVVLTATYGGLDIAWTPYGPEWRMLRKVCALKMLSNPTLDSVYKLRRKEIRDRVGHFYNRAGSLVNVGEQTFLTILNVITSMMWGGTVRGKERATIGAECRQLVSDMTELFGKPNISDFLSWIISV 890
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 29765552 29780536 - Bma001906.2 Bma01g01498 76015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g01498 890 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 2 410 - -
Bma01g01498 890 Pfam Protein of unknown function (DUF 659) 35 186 IPR007021 -
Bma01g01498 890 SUPERFAMILY Cytochrome P450 692 887 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g01498 890 Pfam Cytochrome P450 695 876 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g01498 890 SUPERFAMILY Ribonuclease H-like 58 352 IPR012337 -
Bma01g01498 890 Gene3D Cytochrome P450 686 889 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g01498 890 Gene3D - 395 574 - -
Bma01g01498 890 PANTHER OSJNBA0013A04.12 PROTEIN 2 410 - -
Bma01g01498 890 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 412 524 IPR008930 -
Bma01g01498 890 Pfam Prenyltransferase and squalene oxidase repeat 451 495 IPR001330 GO:0003824
Bma01g01498 890 Pfam Prenyltransferase and squalene oxidase repeat 414 445 IPR001330 GO:0003824
Bma01g01498 890 PRINTS E-class P450 group I signature 838 856 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g01498 890 PRINTS E-class P450 group I signature 722 741 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g01498 890 PRINTS E-class P450 group I signature 746 767 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01498 Bma-Chr1:29765552 Bma14g00007 Bma-Chr14:76955 5.24E-108 dispersed
Bma14g01490 Bma-Chr14:30158905 Bma01g01498 Bma-Chr1:29765552 4.91E-10 dispersed
Bma14g01527 Bma-Chr14:30803557 Bma01g01498 Bma-Chr1:29765552 1.56E-09 dispersed
Bma01g01498 Bma-Chr1:29765552 Bma08g01109 Bma-Chr8:50064677 3.95E-59 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g01498 - - tcc:18606341 637.106