Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g01684 ATGATCGGAGTTTGTTTACCGCTCGTAACTCGCTCAATCAAGGCGTTGAGCCCAGAAAAAAGCTTGTTTATCATCCTCAAGTGCTTTGCTGCTGGAATTATTCTTGCAACTGGATTCATGCATGTTTTGCCTGACTCTTTTGACATGTTATGGTCCGCTTGTTTGAAGGAAAATCCATGGCATAAGTTTCCATTTACTGGCTTTGTTGCTATGCTCTCTGCAATTGTTACTTTAATGGTGGACTCCATGGCTACAAGCCTTTACAGTAAGAAGCATAGGAATGGAGTTTTGCAAAGTGATAGAGTTCATCATGGTGATCAAGAGTCGCCTGCTGCTACTGAGGGAGGACATATTCATGGCCACCATCACCTTCCACCTAAGGATACAACTGGATCCTCTCAGCTTCTTCGGTATCGAGTCGTTGCCATGGTGTTGGAGTTGGGAATAATTGTTCATTCAGTTGTGATCGGCCTTTCTCTTGGAGCATCAAATAACACCTGCACAATCAAAGGTCTAGTGGCTGCTCTTTGCTTCCATCAAATGTTTGAAGGAATGGGTCTTGGTGGCTGTATTCTCCAGGCAGAGTACAAGTTCATCAAAAAGGCAGCTATGGCTTTCTTCTTCTCAGTAACAACTCCATTTGGGATAGCACTTGGTATTGCACTGTCAAAGACCTATAAAGAAAACAGTCCAAATGCCTTAATCACCGTCGGATTACTCAACGCATCGTCCGCCGGCCTTCTGATCTACATGGCTTTGGTTGATCTTCTGGCAGCAGATTTCATGGGAGGAAAGTTGCAGGGAAGCATAAAGTTGCAGATAAAATCCTATATCGCAGTTCTCCTTGGTGCTGGTGGCATGTCTCTAATGGCTAAATGGGCTTGA 885 44.29 MIGVCLPLVTRSIKALSPEKSLFIILKCFAAGIILATGFMHVLPDSFDMLWSACLKENPWHKFPFTGFVAMLSAIVTLMVDSMATSLYSKKHRNGVLQSDRVHHGDQESPAATEGGHIHGHHHLPPKDTTGSSQLLRYRVVAMVLELGIIVHSVVIGLSLGASNNTCTIKGLVAALCFHQMFEGMGLGGCILQAEYKFIKKAAMAFFFSVTTPFGIALGIALSKTYKENSPNALITVGLLNASSAGLLIYMALVDLLAADFMGGKLQGSIKLQIKSYIAVLLGAGGMSLMAKWA 294
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 49007575 49009224 - Bma002234.1 Bma01g01684 76201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g01684 294 Pfam ZIP Zinc transporter 2 291 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Bma01g01684 294 TIGRFAM zip: ZIP zinc/iron transport family 1 294 IPR004698 GO:0005385|GO:0016021|GO:0071577
Bma01g01684 294 MobiDBLite consensus disorder prediction 102 130 - -
Bma01g01684 294 PANTHER ZINC TRANSPORTER 10-RELATED 1 294 - -
Bma01g01684 294 PANTHER ZINC/IRON TRANSPORTER 1 294 - -
Bma01g01684 294 MobiDBLite consensus disorder prediction 102 126 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00139 Bma-Chr1:1340926 Bma01g01684 Bma-Chr1:49007575 3.80E-125 dispersed
Bma01g01684 Bma-Chr1:49007575 Bma14g00866 Bma-Chr14:9727506 4.63E-170 dispersed
Bma01g01684 Bma-Chr1:49007575 Bma01g00924 Bma-Chr1:9022119 9.03E-73 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g01684 K14709 - oeu:111370268 467.618