Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g01707 ATGACTTCTGGTCAGCCTTTGCTGGCTTCATCGGAGTCTTCACCAGTGGTGCAAAATAATCCCTTGACTCAAAATTTTGGCTCCTTTAATTGTCACAGCCGCAATGGTTCTTTCTCATGGTTTAATGACGCAAAAAATGATTTGATTGACGAGAAGGAAGATCACGTTATCTCTCTTGGAGATAGTTGTTTGTCAGAGAATCACCTTAAATGTTCTGCTTCTCTTTCCGAAAAGAGGCAGTGTTGTTCAGTGGTCTCTAGGTTTTCTCAGCAGTTTCCATTTGAGTACCCCACACAGGAAGGGAAACTCCTGGTATCGTGGGGTACAATGGATTTGCGCAGTATTAACAGCAATTCAACGAGCTTTGAACTTTCTAGCGTGCAAGAAAAGTTGAGCAAGTCTCACAGAATTCACCATAAGAGTGGTCAGTTTGAAGATAATTTATATCATGAGGAGAATCCAAGGCTAATTTATATCAGTGATCCCAGGAGAACAAATGACAAATATGAGTTCACAGGCAATGAGATCAGAACTAGCAAGTACACTCTTATGACATTCTTGCCAAAGAATCTCTTTATTCAATTCCATCGGCTTGCTTACCTATACTTCCTAGCAATTGCTGCTCTTAACCAGCTTCCACCACTTGCGGTCTTTGGGAGAACAGTCTCTCTTTTCCCCCTCTTATTTGTTCTTTGTGTCACAGCCATAAAAGATGGCTATGAAGATTGGCGAAGGCATCGGTCAGATCGAAAAGAGAATAACCGTGAGTCTCTGGTACTTCAATCTGGTGAATTTCAATTGAAAAAGTGGGAAAAAATACGAGCAGGTGAGGTTGTTAAGATTCGTGTTGGTGAAACCATTCCTTGTGATATTGTCTTGTTAGGGACAAGTGACCCTAGTGGACTTGCATACATTCAGACAATGAATTTGGATGGTGAGTCAAATTTGAAGACTAGGTATGCTCGGCAGGAAACAGCATTGGCAATTAATGAGGGATGTTCTATTTCTGGACTTATCAGATGTGAACAACCGAACAGGAATATTTATGAGTTCACTGCCAACATGGAATTCAAAGGTCATAAATTTCCCCTTAACCAATCAAACATAGTTTTGCGTGGTTGCCAGCTCAAGAACACTGAATGGATAATGGGAGTTGTTGTCTATGCTGGACAGGAAACAAAAGCAATGTTGAACAGTGCAGTTTCACCGTCCAAAAGAAGCAAACTAGAGGGTTACATGAACCGGGAAACATTGTGGTTGTCCGTCTTCCTTTTTGTCATGTGTTTGGTAGTTTCCATTGGAATGGGCTTATGGCTTATCCGCCACAACGACCGGCTTGACACCTTGCCATATTACAGAAAAATATATTTCTCAACTGGGAATGATAATGGTAAGACATACAAGTATTACGGTATACCTAGAGAAATCTTTTTCTCCTTTCTGAGTTCTATCATAGTATTTCAGATAATGATACCAATCTCTCTTTATATTACGATGGAGTTGGTTAGATTGGGTCAGTCATATTTCATGATTGAAGACAAGGATATGTATGATAGTAGTTCTGGCTCGAGGTTTCAGTGCAGGTCACTAAATATTAATGAAGATCTTGGTCAGATACGCTACGTGTTTTCGGATAAAACAGGAACACTTACAGAAAACAAAATGGAATTCCGAAGGGCGAGTGTATATGGGAAGGATTTCGGAAACTCTTTGATTGTAGCTGATCCATCAAAGTTGGATGATATTTCAGCATCACTTGGTAAAAAAAGATGGAAGCTAAAATATGATGTTCCTGTTGACTTGGAGCTCCTTAAGCTGTTGCACATAGACATAACTGGAGCTGCAAAGAGAGCTGCACAGGAGTTTTTCCTTACATTGGCTGCATGTAACACCGTAATACCCATTATCACTGATTATCAGTGTTCTAATGCAAACAATGGATCCCAAGAAGATGCAGAATGTATTGATTATCAGGGGGAATCTCCTGATGAGCAGGCATTAGTTATTGCAGCTTCAGCTTACGGATATACTCTTTTTGAGAGAACCTCTGGGCATATTGGTATTGACATCAATGGTGTGAAACAAAGCAGGTTTGATGTTTTGGGCTTGCATGAGTTTGATAGTGTGCGCAAAAGAATGTCTGTTGTAATCAGATATCCTGACAATGTTGTAAAGGTTCTCGTGAAAGGTGCTGATACATCAATGCTTAGCATTTTAGCAAATGACTCCGAGATAAATGATGATGTAAGGAGTGGAACTCAAAGGGATTTAAATGACTATTCATCACAAGGTTTACGCACACTTATAGTAGCCTGTAGGGATCTGACAGATGCTGAACTAGAGCAGTGGCAATGTTTGTATGAAGATGCAAGCACTTCTTTGACTGATAGGGCCCTTAAATTACGTCAGACTGCTGCTATTATAGAATGCGACTTAAAACTTCTTGGTGCAACTGCTATTGAGGACAAGCTACAAGATGGTGTGCCAGAAGCTATCGAATCCCTCAGGCAAGCTGGGATAAAGGTCTGGGTTCTCACTGGAGATAAGCAGGAGACTGCTATATCCATTGGTCTCTCATGCAAACTCCTAACTGCAGATATGCAGCGGATAATAATAAATGGAACTTCAGAAAATGAGTGCAGAATTCTTTTGACTCAAGCTATGGAAAAATGTGGTCTTAAATCATTGGACAGATCAAAGCAGAATTTAAAATGGAGAACAAATTCTGAAAATGACTATTCTCAGGCTCTTGGAATCGCCAAGTCAGCTGCTGTAGGGCAATGTTGTACAATGAAAGAAGAAGGAATGCTTTTCGACCTGGCAACTTCATGCAGAGTTGTGCTCTGCTGTCGTGTTGCACCGCTACAGAAAGCTGGGATTGTTGATTTAATTAAGAGTCGGACAGATGATATGACTCTTGCAATAGGCGATGGGGCTAATGACGTGTCAATGATCCAAATGGCTGATGTTGGTGTTGGCATATGTGGTCAAGAAGGGCGACAAGCAGTAATGGCATCTGATTTTGCTATGGGACAGTTCCGTTTTCTTAAAAGATTACTTATAGTGCATGGACACTGGAATTATCAACGTATTGGTTACATGATTCTATACAATTTCTACAGAAATGCTGTTTTCGTGTTGATGCTTTTTTGGTACATACTGTGCACAGCTTTCTCAACTACTTCTGCATTAACGGATTGGAGTAGTGTATTTTATTCAGTTATTTATACATCTATCCCCACTATTTTTGTTGGTATCCTGGACAAAAATTTAAGTCACAAGACATTATTAAAGTATCCGAAGCTATATGGTGCAGGCCATAGACAGGAGGCTTATAATTTACATCTCTTCTGGATCACAATGATTGACACACTATGGCAGAGTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTCTTTTCCTTAAAAGCATTTATATGGTCCATCATGTTAGTTTATTTTATATATGA 5127 26.8 MTSGQPLLASSESSPVVQNNPLTQNFGSFNCHSRNGSFSWFNDAKNDLIDEKEDHVISLGDSCLSENHLKCSASLSEKRQCCSVVSRFSQQFPFEYPTQEGKLLVSWGTMDLRSINSNSTSFELSSVQEKLSKSHRIHHKSGQFEDNLYHEENPRLIYISDPRRTNDKYEFTGNEIRTSKYTLMTFLPKNLFIQFHRLAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDRKENNRESLVLQSGEFQLKKWEKIRAGEVVKIRVGETIPCDIVLLGTSDPSGLAYIQTMNLDGESNLKTRYARQETALAINEGCSISGLIRCEQPNRNIYEFTANMEFKGHKFPLNQSNIVLRGCQLKNTEWIMGVVVYAGQETKAMLNSAVSPSKRSKLEGYMNRETLWLSVFLFVMCLVVSIGMGLWLIRHNDRLDTLPYYRKIYFSTGNDNGKTYKYYGIPREIFFSFLSSIIVFQIMIPISLYITMELVRLGQSYFMIEDKDMYDSSSGSRFQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFRRASVYGKDFGNSLIVADPSKLDDISASLGKKRWKLKYDVPVDLELLKLLHIDITGAAKRAAQEFFLTLAACNTVIPIITDYQCSNANNGSQEDAECIDYQGESPDEQALVIAASAYGYTLFERTSGHIGIDINGVKQSRFDVLGLHEFDSVRKRMSVVIRYPDNVVKVLVKGADTSMLSILANDSEINDDVRSGTQRDLNDYSSQGLRTLIVACRDLTDAELEQWQCLYEDASTSLTDRALKLRQTAAIIECDLKLLGATAIEDKLQDGVPEAIESLRQAGIKVWVLTGDKQETAISIGLSCKLLTADMQRIIINGTSENECRILLTQAMEKCGLKSLDRSKQNLKWRTNSENDYSQALGIAKSAAVGQCCTMKEEGMLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLIVHGHWNYQRIGYMILYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVFYSVIYTSIPTIFVGILDKNLSHKTLLKYPKLYGAGHRQEAYNLHLFWITMIDTLWQSLFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFILFLKSIYMVHHVSLFYI 1708
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 53121903 53128462 - Bma002283.1 Bma01g01707 76224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g01707 1708 ProSitePatterns E1-E2 ATPases phosphorylation site. 545 551 IPR018303 -
Bma01g01707 1708 Gene3D - 655 789 IPR023299 GO:0000166
Bma01g01707 1708 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 146 1139 - -
Bma01g01707 1708 CDD P-type_ATPase_APLT_Dnf-like 173 1129 - -
Bma01g01707 1708 Gene3D - 230 399 - -
Bma01g01707 1708 Gene3D - 812 1015 IPR023214 -
Bma01g01707 1708 Pfam Cation transport ATPase (P-type) 650 736 - -
Bma01g01707 1708 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 475 566 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma01g01707 1708 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 945 1061 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma01g01707 1708 SUPERFAMILY HAD-like 530 1019 IPR036412 -
Bma01g01707 1708 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 549 828 IPR023299 GO:0000166
Bma01g01707 1708 SFLD p-type atpase 527 1026 IPR044492 -
Bma01g01707 1708 PRINTS P-type cation-transporting ATPase superfamily signature 543 557 - -
Bma01g01707 1708 PRINTS P-type cation-transporting ATPase superfamily signature 856 866 - -
Bma01g01707 1708 PRINTS P-type cation-transporting ATPase superfamily signature 975 994 - -
Bma01g01707 1708 Pfam E1-E2 ATPase 255 501 - -
Bma01g01707 1708 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 146 1139 - -
Bma01g01707 1708 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 171 1144 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Bma01g01707 1708 SFLD Haloacid Dehalogenase 527 1026 - -
Bma01g01707 1708 SUPERFAMILY Calcium ATPase, transmembrane domain M 171 1233 IPR023298 -
Bma01g01707 1708 SUPERFAMILY Calcium ATPase, transduction domain A 254 395 IPR008250 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01707 Bma-Chr1:53121903 Bma14g01495 Bma-Chr14:30220082 0 dispersed
Bma07g01409 Bma-Chr7:49858960 Bma01g01707 Bma-Chr1:53121903 1.68E-78 dispersed
Bma12g00575 Bma-Chr12:24942210 Bma01g01707 Bma-Chr1:53121903 4.34E-65 dispersed
Bma01g01707 Bma-Chr1:53121903 Bma03g00029 Bma-Chr3:313319 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g01707 K14802 - csv:101206692 1676.76