Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g01773 AGAGGAATGGATACTCGCAGTAATGGAAGCTCCGATTCTATTGCATCGCTTATCCCAGAAATTAAGTTTACGAAGCTGTTCATCAATGGCGAATTCGTTGACTCAGTTTCAGGAAAAACGTTCGAAACGATCGATCCAAGAACGGAGGAGGTGATAGCGGAGATAGCAGAAGGAGACGAAAAGGACTTGAATTGGGCCGTCAAAGCTGCCCGTGAAAGCCTTGATCATGGCCAATGGCCGCGCGTACTGGTTTTGTACGAAAGGGGAAAGATAATGATGAAATTCGCAAACTTGGTGGACGAACACGTGGAAGAGCTAGCTGCTCTAGACGCCATTGATGCCGGTAAGCTATATGCTCTTGGAAAGGCCTTAGACATTCCAGAATCAGCAAATACGCTGCGTTACTACGCCGGCGCCGCCGATAAGATTCATGGAGAGGTACTAAAAATGGGTCGCGACTTCCATGGTTACACTCTACTAGAGCCAGTCGGCGTCGTCGGCCATATAATCCCTTGGAATTTCCCCTCCATCATGTTCTTCGCCAAGGTCAGCCCTGCGTTGGCCGCTGGCTGCACCATGATCGTCAAGCCGGCTGAGCAAAGCCCGCTCTCGGCGCTCTACTATGCTCATCTTGCTAAACTGGCTGGTATTCCCGACGGAGTGCTGAACGTGGTAACCGGATTTGGAAAAACAGCCGGGGCAGCCCTATGCTCTCACATGGATGTGGATAAAATAAGCTTCACTGGCTCCACAGAAGTTGGGCGACAAATAATGCACGCCTCAGCTAGCAGCAATTTGAAGTCGCTGTGTCTAGAATTAGGAGGCAAATCACCCCTTATAATCTTTGATGATGCTGATTTAGATCAAGCTGCTCAGCTTGCTCTCGTTGGCATTCTCTTCAACAAGGGAGAGATTTGCGTAGCAGGTTCGAGAGTTTTTGTTCAAGAAGGAATTTACAATGAACTCGTGAAAAAACTAGTGGAAATGGCGAAGGGATGGGTGGTGGGAGACCCTTTTGATCCTAAATCTCAACAAGGACCACAGGTGGATAAGAAACAGTTTGAGAAAATTCTTTCCTACATCGAGAGTGGAAAGAGACAAGGAGCCACTTTGCTGACCGGTGGTAAACCCATTGGCAACAAGGGCTATTTCATTGAGCCTACCATTTTTACTGATGTCAAGGAACATATGGCTATATTTCAAGAAGAAATATTTGGACCATTCATGTGCCTTATGAAATTCAAGACGATAGAGGAGGTGATAAAGAGCGCGAACAACACGAAATACGGGCTAGCAGCTGGCGTCGTGACAAAGAACATAGACGTAGCAAACACAGTGTCAAGGTCGGTAAAAGCCGGCATCGTGTGGGTCAACTGCTACCTTGCTTTCGATCGAGGCTGCCCTTACGGAGGCTACAAGATGAGTGGTTTTGGTCGAGATTTTGGGATGGAAGCCCTCAACAACTATCTCCAAATCAAATCTGTTGTCACTCCTTTGTACAACACCCCTTGGCTTTGA 1518 47.56 RGMDTRSNGSSDSIASLIPEIKFTKLFINGEFVDSVSGKTFETIDPRTEEVIAEIAEGDEKDLNWAVKAARESLDHGQWPRVLVLYERGKIMMKFANLVDEHVEELAALDAIDAGKLYALGKALDIPESANTLRYYAGAADKIHGEVLKMGRDFHGYTLLEPVGVVGHIIPWNFPSIMFFAKVSPALAAGCTMIVKPAEQSPLSALYYAHLAKLAGIPDGVLNVVTGFGKTAGAALCSHMDVDKISFTGSTEVGRQIMHASASSNLKSLCLELGGKSPLIIFDDADLDQAAQLALVGILFNKGEICVAGSRVFVQEGIYNELVKKLVEMAKGWVVGDPFDPKSQQGPQVDKKQFEKILSYIESGKRQGATLLTGGKPIGNKGYFIEPTIFTDVKEHMAIFQEEIFGPFMCLMKFKTIEEVIKSANNTKYGLAAGVVTKNIDVANTVSRSVKAGIVWVNCYLAFDRGCPYGGYKMSGFGRDFGMEALNNYLQIKSVVTPLYNTPWL 505
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 60456044 60469053 + Bma002414.1 Bma01g01773 76290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g01773 505 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 271 278 IPR029510 GO:0016491
Bma01g01773 505 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 28 493 IPR016162 GO:0016491
Bma01g01773 505 SUPERFAMILY ALDH-like 18 501 IPR016161 GO:0016491
Bma01g01773 505 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 275 464 IPR016163 GO:0016620
Bma01g01773 505 Pfam Aldehyde dehydrogenase family 32 495 IPR015590 GO:0016491
Bma01g01773 505 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER C4-LIKE 7 505 - -
Bma01g01773 505 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 299 310 IPR016160 GO:0016491
Bma01g01773 505 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 7 505 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01773 Bma-Chr1:60456044 Bma11g00506 Bma-Chr11:6312388 0 dispersed
Bma09g00142 Bma-Chr9:4826596 Bma01g01773 Bma-Chr1:60456044 1.12E-37 transposed
Bma01g01773 Bma-Chr1:60456044 Bma07g00481 Bma-Chr7:5816668 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g01773 K12355 - jre:108992687 786.178