Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g01775 TCGTCTTCAATGGCTTCCAAACCCTATCGCACTGTCAACTTTGATCCTCCCAGAGGATTTTCTCAGAAGCTGAAATCAAATCTGAAGGAAACTTTATTTCCCGACGACCCATTTGCTGAGTTTAAAAATGACAAACCAGGTTGTCGAGCGAAGAAGGTAGTGAAATATTTCGTCCCAATTTTCGACTGGCTTCCTAATTATAATTTGAAGATGTTCCGTTATGATATACTCGCCGGAATCACCATTGCTAGCCTCGCCATTCCTCAGGGAATAAGCTATGCGAAGCTCGCTTCTCTTCCTCCTATTATTGGACTCTATTCTAGCTTCGTTCCACCTCTTGTTTACGCCATTTTTGGAAGCTCTAAGCATTTGGCTGTAGGAACAGTGGCCGCTTGCTCGTTGCTTATTGCTGATACGATCGGCTCCGTCGCTTCCCCAAAAACTGATCCTACATTATATCTTCATCTGGTTTTCACCTCTACCTTTGTAACAGGCGTTGTTCAAGCAGCTCTAGGAATTCTAAGATTAGGGATTTTGGTGGATTTTTTATCTCATTCCACAATCACTGGATTCATGGGAGGAACAGCCACTATTATTTGTCTTCAACAGCTGAAGGGTCTTTTTGGACTGACTCATTTCACCACCAAAACTGACGTTGTTTCTGTTCTTCGTGCTGTCATCACCAATAGACACGAGTGGAAGTGGGAGAGTGCAGTTGTAGGTTTAGTCTTCCTAACTTTCCTTCAATTCACTAGATACCTGAGAAACAGAAATCCCAAGTTATTTTGGGTATCAGCAATAGCTCCGATGATTACCGTAATTGTTGGATGTGTCTTTGCTTACTTCATTCATGGAGAACACCATGGAATCCTAATTGTGGGTGACCTAAAGAAAGGAATAAACCCTCTATCCATTCAGCTTCTCAACTTTAACTCCAAATATTTCTCGACTGTAGTAAAAGCTGGTGTCGTCACTGGATTTGTGGCTTTGGCTGAAGGGATAGCCATTGGAAGGAGCTTCGCTATAATGAAAAATGAACAAGTTGATGGGAACAAAGAGATGGTAGCTTTTGGCCTCATGAACATCATCGGATCCTTGACTTCTTGCTATTTAACCACGGGGCCATTTTCGAAGACAGCAGTAAACTTCAACGCAGGGTGTCGGACAGCAATGTCGAATGTAGTAATGGCTGTTTGCATGGCGCTGACTCTTCTCTTTCTAGCTCCTCTTTTCAGTTACACTCCTCTTGTCGCTCTCTCTGCAATTATCATGTCTGCCATGTTTGGCCTCATTAAATACGAAGAAGCTTTTCACCTTTTCAAGGTTGACAAGTTCGATTTCCTCATCTGCATGGCTGCTTTCTTCGGCGTTACCTTCCTGACCATGGACGTGGGTCTCATGATGTCTGTAAAAATTTTTTTTTTTGATTTTCCGAAACTTCAGGTGGGTCTTGCGATAGTTAGAGCTCTGCTGTACATGGCTAGACCTGCAACTTGCAAGCTTGGAAAGATAGAAAACTCTGCTTTGTACAGAGATGTAGAACAGTATCCTGATTCTCTTCAAATCCCAGGAATCCTTCTTCTTCAGCTTGGATCTCCAGTTTATTATGCAAACTGTAACTATTTGAGAGAGAGGGTTTTTAGATTCATTCGAGAAGGGCAGGCTATCTCAGATTTCAAAGAGGACTTGCTTGAATATGTTTTCCTAGATCTAACTGGAGTGACCGCCATTGACGTCACAGGCATTGAAGCTTTGACAGAAATACACAGAACCTTGGAATCAAACGGAATTAAGATGGGAATAATAAACCCTAGAAGGGACGTGATGGAGAAGATGACACTTTCAAAGCTTACGGACAGAATAGGGAAAGAGTTCATCTTCTTTAGCATAGAAGATGCAGTAGAATCATGTCGTTTTTCACTTCAAAAGATGATGCAAAACGTGGACGACCATCAAACTGCAGATTAA 1968 42.12 SSSMASKPYRTVNFDPPRGFSQKLKSNLKETLFPDDPFAEFKNDKPGCRAKKVVKYFVPIFDWLPNYNLKMFRYDILAGITIASLAIPQGISYAKLASLPPIIGLYSSFVPPLVYAIFGSSKHLAVGTVAACSLLIADTIGSVASPKTDPTLYLHLVFTSTFVTGVVQAALGILRLGILVDFLSHSTITGFMGGTATIICLQQLKGLFGLTHFTTKTDVVSVLRAVITNRHEWKWESAVVGLVFLTFLQFTRYLRNRNPKLFWVSAIAPMITVIVGCVFAYFIHGEHHGILIVGDLKKGINPLSIQLLNFNSKYFSTVVKAGVVTGFVALAEGIAIGRSFAIMKNEQVDGNKEMVAFGLMNIIGSLTSCYLTTGPFSKTAVNFNAGCRTAMSNVVMAVCMALTLLFLAPLFSYTPLVALSAIIMSAMFGLIKYEEAFHLFKVDKFDFLICMAAFFGVTFLTMDVGLMMSVKIFFFDFPKLQVGLAIVRALLYMARPATCKLGKIENSALYRDVEQYPDSLQIPGILLLQLGSPVYYANCNYLRERVFRFIREGQAISDFKEDLLEYVFLDLTGVTAIDVTGIEALTEIHRTLESNGIKMGIINPRRDVMEKMTLSKLTDRIGKEFIFFSIEDAVESCRFSLQKMMQNVDDHQTAD 655
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 60482558 60486662 + Bma002416.1 Bma01g01775 76292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g01775 655 Gene3D STAS domain 495 639 IPR036513 -
Bma01g01775 655 SUPERFAMILY SpoIIaa-like 517 637 IPR036513 -
Bma01g01775 655 ProSitePatterns SLC26A transporters signature. 101 122 IPR018045 GO:0008271|GO:0008272
Bma01g01775 655 Pfam STAS domain 516 633 IPR002645 -
Bma01g01775 655 PANTHER SULFATE TRANSPORTER 7 646 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bma01g01775 655 CDD STAS_SulP_like_sulfate_transporter 516 630 - -
Bma01g01775 655 TIGRFAM sulP: sulfate permease 59 633 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bma01g01775 655 Pfam Sulfate permease family 72 453 IPR011547 GO:0016021
Bma01g01775 655 ProSiteProfiles STAS domain profile. 515 637 IPR002645 -
Bma01g01775 655 PANTHER SULFATE TRANSPORTER 3.5-RELATED 7 646 IPR030316 GO:1902358
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01775 Bma-Chr1:60482558 Bma15g00623 Bma-Chr15:7974865 0 dispersed
Bma13g00014 Bma-Chr13:285982 Bma01g01775 Bma-Chr1:60482558 0 transposed
Bma01g01775 Bma-Chr1:60482558 Bma07g00479 Bma-Chr7:5799909 1.37E-46 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g01775 K17471 - qsu:111988838 944.495