Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g01781 ATGATGGAATCTCTCATTTTTAGATCGTTTTTCCTCGTCTCTCTATGTTTCAAACTCTGTGTTTATTCCGCTTTTTCCCAGCCGGATTTTGAGCGTCGAAACTGCACAAACGCTGGTTCCTACCCCGACGACGGCCCCTTCAAGAGGAATCTCGACACCGTACTTTCTGCAATTTCTTCCAACACCAACATCGACTATGGTTATTACAATTTCTCCGCTGGAGATGGCCCTTCCAGGGTGAACGCCATCGCTCTTTGTATAGGAGACCTGCCAATCGACGAATGTCGAAGCTGCGTTTATAACGCCACTATCAGGATTACAAAGAGTTGTCCGAACAAAATTGAGGCGGTGGGATTGTACTTGAATTGCATGCTTCGTTATTCAAACAAATCCATAAAGAGCAACGATGATATGCTAGATCTTCACAATCCAGTAAAGGTAGCAGACGTTGATGGATACAATGAAGCAGCTGTAAACTTAACGGAGAGATTGAGAGACAAAGCTGCATCTGGCTCTTCTACTCGTAAGCTGGAAACTGGAGAAATCGTAGCCCCATCGTCCAAGACCATTTACGGGCTCGTTCAGTGCGCTCCTGATTTATCGAAACTGGAATGCGAGGATTGCTTGAATCGAGCCATACGACATATTCCTTCGTGTTGTAAGGGAAACGACGGATTACGATTGATTCAGTCCGTTTGTCTTTTGTGGTATGAGAACCACAGGTTCTACAGGGAATCGCTCTCATCATCGCCCCCATCGTTGTTGTCACCACAGCCTCCGCCAATCGGAGAAGTAAGTGACAGAGCTAGAACCATCATTATCGTTGTTGTCACCTCTGTCGCAGGATTGATCCTCATCGTCGCCATTTCCGCTGTCTTAATATTTAGAAAGAGAAAGCATGCAAATTCAACGGAGGGAGTAGAGAGTCTTCCTTTGCGAGAACAAGACGAGGATGGAATATTCACATCTGAGACGCTGCAATTTGAGTTTGCTGTTATTAAGGCAGCAACAGATGATTTTTCTGATGCAAACAAGCTTGGAGAAGGTGGGTTTGGACCCGTTTATAAGGGTAGGCTATCTAATGGAGAAACCATTGCCGTGAAGAGGCTTTCGAGGAACTCGGTGCAAGGAGACCCTGAATTTAAAAATGAAGTCATTTTGGTCGGTAAGCTTCAACACCGGAACTTAGTCAGGCTCTTAGGATTCAGCTTTCGAGGAAATGAGAGGCTTCTTGTTTATGAATTTGTGCCCAATGTAAGCCTTGATCGATTTATATTTGATGCACAAAGACGGACAAATTTAGACTGGGACAGGAGATTCAAAATCATAGGTGGCATTGCTCGAGGACTACTCTATCTTCACGAAGACTCTCGGCTTAGAATTATTCATCGTGATCTCAAAGCCAGCAATATTCTGTTGGATGCAGAAATGAATGCCAAAATAGCAGATTTTGGATTGGCAAAACTGTTTGAAATGGACGAGACGCAAGGGAACACTAGCAGGGTAGTGGGTACCTATGGTTATATGGCACCAGAGTATGTTCTCCATGGGCAGTTCTCAGTAAAATCTGATGTGTACAGCTTCGGCATAATAATTCTTGAGATAGTTAGCGGGCAAAAGAACAACTGCTTCCGCAACGGAGAAAGAGTGCAAGACCTCTTGAGTTTTGTTTGGAATAGCTGGAGAGAAGGAAGAGGTTCAAACGTAATAGACCCAACACTGACTTCAGGTTCCAAAAATGAAATGATGAGATGCATTCACATCGGGCTGCTGTGCGTTCAAGAAAACCCGGCCCAGAGACCGACAATGGCGTCCGTGGTTCTAATGCTCAACAGCTTCTCTCTCTCCCTCCCCGTCCCAGTCGGGCCTGCATTTTATGCGAGCACCACCGTCGTCGAAGCAGAGAACACAGAGCCAGCAGGTTCCAAAAGCAACTCCCTTGGCCATTCAAACGAAGCTTCCATCACCAAGAGTGACCTCAATCCTCGCTAG 1992 45.58 MMESLIFRSFFLVSLCFKLCVYSAFSQPDFERRNCTNAGSYPDDGPFKRNLDTVLSAISSNTNIDYGYYNFSAGDGPSRVNAIALCIGDLPIDECRSCVYNATIRITKSCPNKIEAVGLYLNCMLRYSNKSIKSNDDMLDLHNPVKVADVDGYNEAAVNLTERLRDKAASGSSTRKLETGEIVAPSSKTIYGLVQCAPDLSKLECEDCLNRAIRHIPSCCKGNDGLRLIQSVCLLWYENHRFYRESLSSSPPSLLSPQPPPIGEVSDRARTIIIVVVTSVAGLILIVAISAVLIFRKRKHANSTEGVESLPLREQDEDGIFTSETLQFEFAVIKAATDDFSDANKLGEGGFGPVYKGRLSNGETIAVKRLSRNSVQGDPEFKNEVILVGKLQHRNLVRLLGFSFRGNERLLVYEFVPNVSLDRFIFDAQRRTNLDWDRRFKIIGGIARGLLYLHEDSRLRIIHRDLKASNILLDAEMNAKIADFGLAKLFEMDETQGNTSRVVGTYGYMAPEYVLHGQFSVKSDVYSFGIIILEIVSGQKNNCFRNGERVQDLLSFVWNSWREGRGSNVIDPTLTSGSKNEMMRCIHIGLLCVQENPAQRPTMASVVLMLNSFSLSLPVPVGPAFYASTTVVEAENTEPAGSKSNSLGHSNEASITKSDLNPR 663
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 60575102 60581134 - Bma002423.1 Bma01g01781 76298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g01781 663 ProSiteProfiles Protein kinase domain profile. 340 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g01781 663 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 15 632 - -
Bma01g01781 663 SMART serkin_6 340 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g01781 663 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 15 632 - -
Bma01g01781 663 Pfam Salt stress response/antifungal 151 239 IPR002902 -
Bma01g01781 663 Pfam Salt stress response/antifungal 35 129 IPR002902 -
Bma01g01781 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Bma01g01781 663 ProSiteProfiles Gnk2-homologous domain profile. 135 242 IPR002902 -
Bma01g01781 663 Gene3D - 29 131 IPR038408 -
Bma01g01781 663 Gene3D - 137 242 IPR038408 -
Bma01g01781 663 Gene3D Transferase(Phosphotransferase) domain 1 416 616 - -
Bma01g01781 663 SUPERFAMILY Protein kinase-like (PK-like) 320 610 IPR011009 -
Bma01g01781 663 MobiDBLite consensus disorder prediction 636 663 - -
Bma01g01781 663 Pfam Protein kinase domain 341 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g01781 663 ProSiteProfiles Gnk2-homologous domain profile. 29 132 IPR002902 -
Bma01g01781 663 CDD STKc_IRAK 346 611 - -
Bma01g01781 663 Gene3D Phosphorylase Kinase; domain 1 302 415 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01781 Bma-Chr1:60575102 Bma11g00350 Bma-Chr11:3659451 0 dispersed
Bma01g01781 Bma-Chr1:60575102 Bma07g00473 Bma-Chr7:5727607 2.53E-180 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66288 PF00069 Pkinase 6.80E-46 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g01781 - - vvi:100246759 702.59