Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g01846 ATGGCGGAAGAGTTGAAGCTGTTTGGAGCAACGGGAAGCCCATTCAGCCACAGAGTGGAGGTAGCTCTGATACTGAAAGGAGTCGAATATGAATACGTCGACGAAGACGTGTACGGAACCAAAAGCTCAGAGCTTCTGAAATACAATCCGGTTCACAAGAAGATTCCCGTGCTTCTGCACAACGGGAAGCCCTTGGCTGAATCCCTCGTCATTCTTGACTACATCGACGACGCGTTCGGAGGTTATCCTCTCCTGCCAAAGGATCCGTACGACAAAGCCATGGCTCGATTCTGGGCCAAGTTCTTCGACGACGAGGTCCGTCCGTGCTTTTGGAAAGCTTGCTGGAGTGAGGGGGAGGAGCGAGAAAAGGCGGTAGAGAAGGCGAAGGAGGTTCTGAAAATCCTAGAAAACGAGCTGGGCGATAAGCGATTCTTCGGAGGAGAGGCGGTCGGATATGTCGACATTGCTGCCAACTCCTTAAGCTTTTGGTATGGGATATTTCAAGAACTAGCCGGACTTGAATTGCTGACCACTAACGACTTCCCCAAGCTCTGCCAATGGCGGGAGGAGTTTGTTAGTCAGAGCTGTGTCAAAGAAACTCTGCCTCATAAGGAAAGCTTACTCGTATTAATACAATCTCGTTTCGCCAAGAAGAAACTTGAATGTCCTTAA 672 49.7 MAEELKLFGATGSPFSHRVEVALILKGVEYEYVDEDVYGTKSSELLKYNPVHKKIPVLLHNGKPLAESLVILDYIDDAFGGYPLLPKDPYDKAMARFWAKFFDDEVRPCFWKACWSEGEEREKAVEKAKEVLKILENELGDKRFFGGEAVGYVDIAANSLSFWYGIFQELAGLELLTTNDFPKLCQWREEFVSQSCVKETLPHKESLLVLIQSRFAKKKLECP 223
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 66517704 66518443 - Bma002546.1 Bma01g01846 76363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g01846 223 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 220 IPR010987 -
Bma01g01846 223 Coils Coil 118 138 - -
Bma01g01846 223 CDD GST_C_Tau 89 214 IPR045074 GO:0004364|GO:0006749
Bma01g01846 223 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Bma01g01846 223 Gene3D Glutaredoxin 1 84 - -
Bma01g01846 223 SFLD Main.3: Omega- and Tau-like 2 219 IPR045073 -
Bma01g01846 223 Pfam Glutathione S-transferase, N-terminal domain 4 76 IPR004045 -
Bma01g01846 223 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 213 IPR045073 -
Bma01g01846 223 PANTHER GLUTATHIONE S-TRANSFERASE-RELATED 4 213 - -
Bma01g01846 223 Gene3D - 85 220 - -
Bma01g01846 223 Pfam Glutathione S-transferase, C-terminal domain 104 194 IPR004046 -
Bma01g01846 223 CDD GST_N_Tau 5 79 - -
Bma01g01846 223 SFLD Main (cytGST) 2 219 - -
Bma01g01846 223 SUPERFAMILY GST C-terminal domain-like 77 215 IPR036282 -
Bma01g01846 223 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 83 IPR004045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01846 Bma-Chr1:66517704 Bma05g01161 Bma-Chr5:50679033 4.63E-63 dispersed
Bma13g00910 Bma-Chr13:39481538 Bma01g01846 Bma-Chr1:66517704 1.76E-45 dispersed
Bma01g01843 Bma-Chr1:66420897 Bma01g01846 Bma-Chr1:66517704 2.15E-128 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g01846 K00799 - qsu:111995985 272.707