Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g01856 ATGGCGGACTTTCGATTTCTCAGCTTCTTCTCTGTTTTCATCTCCCTCACAGTGCCTTCCTTTTCCCAGACCGCCGACCTCTTCTACCCTGGATTCAAGAACGCAGAAGCAAATCTAACCTTGATCGGCATAGCTGAGATCGAGGAAAATGGAATTTTGAAACTAACAAACGAGACGAGTAGATTACTGGGTAGAGCTTTTTATGCTTCCCCTTTTCAGTTCAAGAACTCCTTAAATGGTAAAGTTTTCTCCTTTTCTTCGTCTTTTGTTTTAGGAATAATTCCCGAGTATCCGAAGCTCGGCGGCCATGGAATGGCTTTCGCCATAGCTCCATCGAAGGATTTCAAAGCTCTCCCCAGTCAGTATCTGGGTCTTCTTACATCCAACGACACCGGTAATTTCTCGAACCATCTCTTCGCGGTCGAGTTCGATACTGTTCAGGATTTTGAGTTTGGAGATATCAACGATAACCATGTCGGAATAAACATTAACAGTATGGTATCGAATGCTTCCGCCACTGCCGCTTATTACTCCGATGAATCAACGAAACAGGATCTGAATCTGAAAGGTGGGAAAGCCGTTAAAGTTTGGATTGATTACGATTCGGAGAATTCTGTTGTCAATGTTACTATTTCTCCATTTTCCACCAAACCAAGTAAACCTATGTTGTCATTCATGGTAGATCTCTCGCCGATTTTTGAGGATTATATGTATGTCGGATTTTCTGCTTCAACTGGTTTGCTCGCTAGCTCTCACTACGTTTTAGGATGGAGCTTCAAGATGAACGGACAAGCTCAAGAACTCGATTTATCCTCTCTTCCTCCACTTCCAGTTGTAGAAACCCCAAAAAAGCAGACATCTTTAACAATCGGCGTTTCAGTTGCGGCGACCATCGTTTTCGTATTTGCTGTGGTTGCTGTCGTTTATATTGTAAGAAAAATTAAGAATGCTGATATAATCGAGCCATGGGAGCTTCAAGTTGGCCCCCATAGATACTCCTATAAGGAGCTCAAGCAAGCGACCAGACGTTTCAGAGACAAAGAACTCCTTGGCCACGGTGGGTTCGGGAAAGTCTACAAAGGAACATTACCCAATTCGAAAATCCAAATCGCAGTTAAGCGTGTTTCCCATGAATCAAAACAGGGTCTGCGAGAATTCATCGCCGAAATCGCCACCATTGGCAGGCTTCGACACCGGAACTTAGTGCAGCTCCTCGGATGGTGCCGCCGCCGGGGTGATCTTCTCCTTGTTTACGATTTTATGGCCAACGGAAGCTTGGACAAATTCCTTTTCGACGACCCAGAAATTATTTTGAATTGGGAGCAAAGATTTAAGATTATAAAGGACGTTGCTTCAGGCCTATTATATCTACACGAAGGCTACGAACAGGTGGTGATTCACAGAGACGTAAAGGCAAGCAACGTTTTGCTCGACAGTGATTTGACCGGAAAAGTCGGAGACTTTGGCCTAGCTAGGCTCTACGAACACGGGGCAAATCCGAGTACGACGAGGGTCGTCGGAACTTTAGGCTATCTAGCACCGGAACTACCGAGAACCGGGAAAGCCACAACCAGCACAGATGTATTCGCGTTCGGAGCTGTTCTGCTCGAAGTTGCGAGCGGAAGAAGACCCATCGATCCAAAAGCTATGCCAGAGGAGCTAGTTTTGGTCGATTGGGTGTGGGAAAAGTACAAGGAGGGAGCTATTTTCGACGTTGTCGATCAAAAACTGAACGGCGACTACGACGAGGTTGAAATGGCGGTGGTGTTGAAATTGGGGTTGATGTGTTCGAACAACTCGCCGGTGGATCGGCCGAGCATGAGGCAGGTAGTGAGGTATTTGGAGGGGGAGATTGGTCTGCCAAACGATTTGATAGACGCCGGTGGGTACGACGGAGGGAAGGGCGGACATGGCGAGGGGTTTGATGATTTCGTCAACTCTTCAGTTTCTTCTTCGTTTAATCCAGCTACCTCCTACTCCTTCGCAGCAAATAAGGACATGGATGATAGTTTTGCTTTGCTTTCTACTTCTCCAAGTCCTCTTCCTGGCAGAGACTAA 2058 46.36 MADFRFLSFFSVFISLTVPSFSQTADLFYPGFKNAEANLTLIGIAEIEENGILKLTNETSRLLGRAFYASPFQFKNSLNGKVFSFSSSFVLGIIPEYPKLGGHGMAFAIAPSKDFKALPSQYLGLLTSNDTGNFSNHLFAVEFDTVQDFEFGDINDNHVGININSMVSNASATAAYYSDESTKQDLNLKGGKAVKVWIDYDSENSVVNVTISPFSTKPSKPMLSFMVDLSPIFEDYMYVGFSASTGLLASSHYVLGWSFKMNGQAQELDLSSLPPLPVVETPKKQTSLTIGVSVAATIVFVFAVVAVVYIVRKIKNADIIEPWELQVGPHRYSYKELKQATRRFRDKELLGHGGFGKVYKGTLPNSKIQIAVKRVSHESKQGLREFIAEIATIGRLRHRNLVQLLGWCRRRGDLLLVYDFMANGSLDKFLFDDPEIILNWEQRFKIIKDVASGLLYLHEGYEQVVIHRDVKASNVLLDSDLTGKVGDFGLARLYEHGANPSTTRVVGTLGYLAPELPRTGKATTSTDVFAFGAVLLEVASGRRPIDPKAMPEELVLVDWVWEKYKEGAIFDVVDQKLNGDYDEVEMAVVLKLGLMCSNNSPVDRPSMRQVVRYLEGEIGLPNDLIDAGGYDGGKGGHGEGFDDFVNSSVSSSFNPATSYSFAANKDMDDSFALLSTSPSPLPGRD 685
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 68080562 68082619 + Bma002570.1 Bma01g01856 76373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g01856 685 CDD lectin_legume_LecRK_Arcelin_ConA 29 263 IPR001220 GO:0030246
Bma01g01856 685 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 8 668 - -
Bma01g01856 685 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Bma01g01856 685 Pfam Legume lectin domain 28 273 IPR001220 GO:0030246
Bma01g01856 685 Pfam Protein tyrosine and serine/threonine kinase 347 614 IPR001245 GO:0004672|GO:0006468
Bma01g01856 685 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 279 IPR013320 -
Bma01g01856 685 Gene3D - 25 262 - -
Bma01g01856 685 Gene3D Transferase(Phosphotransferase) domain 1 421 623 - -
Bma01g01856 685 ProSitePatterns Protein kinases ATP-binding region signature. 350 373 IPR017441 GO:0005524
Bma01g01856 685 CDD STKc_IRAK 350 616 - -
Bma01g01856 685 Gene3D Phosphorylase Kinase; domain 1 329 420 - -
Bma01g01856 685 SMART serkin_6 344 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g01856 685 SUPERFAMILY Protein kinase-like (PK-like) 326 616 IPR011009 -
Bma01g01856 685 PANTHER - 8 668 - -
Bma01g01856 685 ProSiteProfiles Protein kinase domain profile. 344 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g01856 Bma04g00680 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01856 Bma-Chr1:68080562 Bma04g00685 Bma-Chr4:6736610 0 dispersed
Bma04g00704 Bma-Chr4:7138426 Bma01g01856 Bma-Chr1:68080562 2.54E-14 dispersed
Bma02g00650 Bma-Chr2:17988520 Bma01g01856 Bma-Chr1:68080562 0 transposed
Bma10g00280 Bma-Chr10:2521552 Bma01g01856 Bma-Chr1:68080562 0 transposed
Bma12g00328 Bma-Chr12:5269475 Bma01g01856 Bma-Chr1:68080562 4.36E-105 transposed
Bma14g02140 Bma-Chr14:45893560 Bma01g01856 Bma-Chr1:68080562 5.31E-113 transposed
Bma01g01856 Bma-Chr1:68080562 Bma04g00680 Bma-Chr4:6639812 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66292 PF07714 PK_Tyr_Ser-Thr 7.10E-47 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g01856 - - jre:109006813 968.378