Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g01870 ATGGCTACCCCTAGGTTCCGAGCTCTTCTTCGATGCAAAAAATGGTCTAGGAAGGACTGTGCAATCCTTGGGGCTGGTTTCGCCTTCATCCTTTTTTTCCTATCTTTTGCTTCCGATGGGTATCGCCAAGACTCCCGCGCGAATGTTCCATTCCAACTCGCCCCTCAAACTGCGGATTTGGTCGATTTGACTCTGTTACGCAATGCTAAGGATAGGGGAGCTGTGTGTTTGGATGGGAGTTTGCCTGGGTACCATTTTCTTAAGGGTTTCGGGTCTGGTTCTAGTAATTGGGTGCTTCACATTGAGGGAGGAGGTTGGTGTGATTCAGTTGCATCTTGTTCTTCGCGGAAAACGACCTCCTTAGGTTCATCCCAGTTCATGGAAACTAAAGATCGCTTCGCTGGAATTTTAAGTCGTGACCCATTACAGAATCCTGATTTCTTTAACTGGAACAAAGTCAAGATACGTTATTGTGATGGAGCATCTTTCTCTGGCAACCCTGAGAGTGAAATGAAGAATGGACCTAAACTTTACTTCAGAGGAAATCTCATCTGGGAAGCAGTTATGGATGAGCTATTAGCAGCTGGCTTGTCCAAAGCAAAAAATGCTCTTCTTTCAGGATGCTCTGCTGGTGGTTTGGCAACCCTAATCCATTGTGATGACTTTCGAATGCGACTCCCAGAGGATGCAACAGCAAAATGTCTAGCTGATGCTGGGTTTTTCCTTGATGAGAAAGACGTTACTGGAAATCATACCATGAGATCTTTCTATAGAGATACTGTCTACCTTCAGTGTTTCTTTCCTCGGGAAGTCATAAAAAACATACGCACACCAGTGTTCATTGTCAACCCCGCTTATGATTTTTGGCAGATACAACATGTCTTAGCACCTGATGGATCAGATCCTGCTGGCTATTGGCAGAGCTGTAAACTTAACATTCGTAATTGCAATCACGAGCAGCTAGAAACTCTACATGAATTTCGAAGTTCTCTGCTGAAGTCGCTGGATGAGTTCCAGCAAATGAAAGGAGGGGGAATGTTTATAAATTCTTGCTTCATTCATTGCCAGACATGGTTTACAGAGACATGGCATTCCCCCACTTCTCCAAGAATAAACAATAAGACAATAGCCGAAGCAGTAGGTGATTGGTACTTTGACCGTCAAGTGACAAAGTTAATCGACTGTCCTTATCCATGCAATCCCACCTGCTTCAATATGGATTTCACTCGAGGTCGATCAAATTAA 1245 44.1 MATPRFRALLRCKKWSRKDCAILGAGFAFILFFLSFASDGYRQDSRANVPFQLAPQTADLVDLTLLRNAKDRGAVCLDGSLPGYHFLKGFGSGSSNWVLHIEGGGWCDSVASCSSRKTTSLGSSQFMETKDRFAGILSRDPLQNPDFFNWNKVKIRYCDGASFSGNPESEMKNGPKLYFRGNLIWEAVMDELLAAGLSKAKNALLSGCSAGGLATLIHCDDFRMRLPEDATAKCLADAGFFLDEKDVTGNHTMRSFYRDTVYLQCFFPREVIKNIRTPVFIVNPAYDFWQIQHVLAPDGSDPAGYWQSCKLNIRNCNHEQLETLHEFRSSLLKSLDEFQQMKGGGMFINSCFIHCQTWFTETWHSPTSPRINNKTIAEAVGDWYFDRQVTKLIDCPYPCNPTCFNMDFTRGRSN 414
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 68613085 68619011 - Bma002592.2 Bma01g01870 76387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g01870 414 Pfam Pectinacetylesterase 56 264 IPR004963 GO:0016787
Bma01g01870 414 PANTHER PECTIN ACETYLESTERASE 4 25 403 - -
Bma01g01870 414 SUPERFAMILY alpha/beta-Hydrolases 185 294 IPR029058 -
Bma01g01870 414 PANTHER NOTUM-RELATED 25 403 IPR004963 GO:0016787
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01870 Bma-Chr1:68613085 Bma05g00898 Bma-Chr5:46826758 2.17E-133 dispersed
Bma01g01870 Bma-Chr1:68613085 Bma12g00626 Bma-Chr12:27503088 4.53E-135 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g01870 K19882 - qsu:111992987 606.29