Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma01g01879 | ATGGCTGGCAAGGGAGAAGGACCGGCCATCGGAATTGATCTCGGTACTACCTACTCTTGCGTTGGTGTTTGGCAACATGATCGCGTTGAGATCATTGCCAACGACCAGGGTAACAGGACGACGCCGTCCTACGTTGGTTTTACCGATTCCGAGCGTCTGATCGGCGATGCAGCCAAGAATCAGGTCGCCATGAATCCCATCAACACCGTCTTTGATGCTAAGAGGTTGATAGGTCGCAGATTTAGCGATGCCCCAGTCCAAAGTGACATTAAGTTGTGGCCATTCAAGGTCATTCCTGGTGCTGGTGACAAGCCCATGATCGTAGTCAACTACAAAGGTGAAGATAAGCAGTTTGCTGCTGAAGAGATCTCTTCTATGGTCCTCATTAAAATGCGTGAGATTGCAGAGGCCTACCTTGGTTCGACTATAAAGAATGCTGTTGTTACTGTCCCTGCTTACTTCAATGATTCTCAGCGTCAGGCTACCAAGGATGCTGGTGTCATTGCTGGTCTCAATGTCATGCGAATTATTAATGAGCCCACAGCTGCTGCTATTGCTTATGGTCTTGACAAGAAGGCCACAAGTGTGGGTGAGAAGAATGTTTTGATCTTCGACCTTGGTGGTGGTACTTTTGATGTATCTCTTCTCACCATTGAAGAGGGTATCTTTGAGGTTAAGGCTACTGCTGGTGACACCCATCTTGGTGGTGAAGATTTTGATAACAGAATGGTTAACCATTTCGTACAAGAGTTCAAGAGGAAGAACAAGAAGGACATTAGTGGCAACCCTAGAGCACTGAGGAGGCTGAGGACATCCTGTGAGAGAGCTAAGAGGACACTTTCTTCCACTGCTCAGACCACCATTGAAATTGACTCCTTGTACGAGGGAATTGATTTCTACTCCACCATTACTCGTGCCAGATTTGAGGAGTTGAACATGGATCTCTTTAGAAAGTGTATGGAACCTGTTGAGAAATGTTTGAGGGATGCAAAGATGGACAAAAGCTCGGTCCACGATGTTGTTCTTGTAGGTGGTTCTACCAGAATTCCCAAGGTGCAACAGCTTCTGCAGGATTTCTTCAATGGTAAGGAACTCTGCAAGAGCATCAATCCTGACGAAGCTGTGGCATATGGTGCAGCAGTTCAAGCTGCTATCTTGAGTGGTGAAGGTAATGAGAAGGTTCAGGATCTCCTTCTCTTGGACGTTACCCCACTCTCCCTCGGTTTGGAAACAGCTGGAGGTGTGATGACTGTTCTGATACCGAGGAACACAACTATTCCAACCAAGAAAGAACAAGTTTTCTCAACCTACTCTGATAACCAGCCTGGTGTGTTGATCCAAGTGTATGAAGGTGAGAGAACCAGGACCCGGGACAACAATTTGCTGGGTAAGTTCGAGTTGTCGGGCATTCCTCCTGCCCCCAGAGGTGTACCCCAAATCACAGTCTGCTTCGATATTGATGCTAATGGTATCTTGAACGTAGCTGCGGAGGACAAGACCACGGGTCAAAAGAACAAGATCACCATTACAAATGACAAGGGAAGACTTTCCAAGGATGAGATTGAAAAGATGGTACAGGAAGCCGAGAAGTACAAGTCAGAAGATGAAGAGCATAAGAAGAAGGTAGAATCAAAAAATGCGTTGGAGAACTACGCATACAACATGAGAAACACAGTGAAGGATGAGAAGATTGGCGCCAAGCTTTCCCCCGAGGATAAGAAGAAGATTGAAGATGCTATTGAGCAGGCCATCCAATGGCTGGACAGCAATCAACTTGCGGAGGCTGATGAGTTTGACGACAAGATGAAGGAATTGGAGAGCGTGTGCAACCCCATAATTGCGAAGATGTACCAGGGTGCGGGCGGTGACATGGGTGGTGGTATGGATGAAGGTGCCCCTGCCGGTGGAGGCAGTGCCGGGCCCAAGATTGAGGAAGTCGATTAA | 1944 | 47.38 | MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDAPVQSDIKLWPFKVIPGAGDKPMIVVNYKGEDKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVAAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVESKNALENYAYNMRNTVKDEKIGAKLSPEDKKKIEDAIEQAIQWLDSNQLAEADEFDDKMKELESVCNPIIAKMYQGAGGDMGGGMDEGAPAGGGSAGPKIEEVD | 647 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 69104163 | 69106470 | - | Bma002609.1 | Bma01g01879 | 76396 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma01g01879 | 647 | Gene3D | Actin; Chain A, domain 4 | 235 | 318 | - | - | |
Bma01g01879 | 647 | PRINTS | 70kDa heat shock protein signature | 36 | 48 | - | - | |
Bma01g01879 | 647 | PRINTS | 70kDa heat shock protein signature | 396 | 415 | - | - | |
Bma01g01879 | 647 | PRINTS | 70kDa heat shock protein signature | 477 | 493 | - | - | |
Bma01g01879 | 647 | PRINTS | 70kDa heat shock protein signature | 209 | 219 | - | - | |
Bma01g01879 | 647 | PRINTS | 70kDa heat shock protein signature | 146 | 166 | - | - | |
Bma01g01879 | 647 | PRINTS | 70kDa heat shock protein signature | 369 | 389 | - | - | |
Bma01g01879 | 647 | PRINTS | 70kDa heat shock protein signature | 8 | 21 | - | - | |
Bma01g01879 | 647 | PRINTS | 70kDa heat shock protein signature | 58 | 66 | - | - | |
Bma01g01879 | 647 | PRINTS | 70kDa heat shock protein signature | 337 | 353 | - | - | |
Bma01g01879 | 647 | ProSitePatterns | Heat shock hsp70 proteins family signature 3. | 340 | 354 | IPR018181 | - | |
Bma01g01879 | 647 | MobiDBLite | consensus disorder prediction | 622 | 647 | - | - | |
Bma01g01879 | 647 | PANTHER | HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE | 1 | 628 | - | - | |
Bma01g01879 | 647 | Gene3D | - | 71 | 126 | - | - | |
Bma01g01879 | 647 | Gene3D | - | 192 | 366 | - | - | |
Bma01g01879 | 647 | Coils | Coil | 521 | 541 | - | - | |
Bma01g01879 | 647 | Gene3D | - | 546 | 619 | IPR029048 | - | |
Bma01g01879 | 647 | SUPERFAMILY | Actin-like ATPase domain | 8 | 191 | IPR043129 | - | |
Bma01g01879 | 647 | Pfam | Hsp70 protein | 9 | 618 | IPR013126 | GO:0005524|GO:0140662 | |
Bma01g01879 | 647 | ProSitePatterns | Heat shock hsp70 proteins family signature 1. | 12 | 19 | IPR018181 | - | |
Bma01g01879 | 647 | Gene3D | - | 10 | 384 | - | - | |
Bma01g01879 | 647 | ProSitePatterns | Heat shock hsp70 proteins family signature 2. | 203 | 216 | IPR018181 | - | |
Bma01g01879 | 647 | SUPERFAMILY | Actin-like ATPase domain | 198 | 388 | IPR043129 | - | |
Bma01g01879 | 647 | CDD | HSPA1-2_6-8-like_NBD | 9 | 387 | - | - | |
Bma01g01879 | 647 | SUPERFAMILY | Heat shock protein 70kD (HSP70), C-terminal subdomain | 543 | 622 | IPR029048 | - | |
Bma01g01879 | 647 | Gene3D | Substrate Binding Domain Of DNAk; Chain A, domain 1 | 391 | 545 | IPR029047 | - | |
Bma01g01879 | 647 | PANTHER | HEAT SHOCK PROTEIN 70KDA | 1 | 628 | IPR013126 | GO:0005524|GO:0140662 | |
Bma01g01879 | 647 | SUPERFAMILY | Heat shock protein 70kD (HSP70), peptide-binding domain | 392 | 549 | IPR029047 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma01g01879 | Bma10g00293 | CCT | |
Bma01g01879 | Bma10g00293 | ECH | |
Bma01g01879 | Bma04g00660 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g01879 | Bma-Chr1:69104163 | Bma07g00731 | Bma-Chr7:19203020 | 0 | dispersed | |
Bma06g01631 | Bma-Chr6:52422748 | Bma01g01879 | Bma-Chr1:69104163 | 6.51E-85 | dispersed | |
Bma09g00399 | Bma-Chr9:33660075 | Bma01g01879 | Bma-Chr1:69104163 | 5.20E-40 | dispersed | |
Bma06g01034 | Bma-Chr6:47156609 | Bma01g01879 | Bma-Chr1:69104163 | 0 | transposed | |
Bma13g00506 | Bma-Chr13:9709869 | Bma01g01879 | Bma-Chr1:69104163 | 0 | transposed | |
Bma13g00698 | Bma-Chr13:19664215 | Bma01g01879 | Bma-Chr1:69104163 | 1.03E-163 | transposed | |
Bma01g00660 | Bma-Chr1:6017630 | Bma01g01879 | Bma-Chr1:69104163 | 3.19E-60 | transposed | |
Bma01g01879 | Bma-Chr1:69104163 | Bma10g00293 | Bma-Chr10:2671676 | 0 | wgd | |
Bma01g01879 | Bma-Chr1:69104163 | Bma03g00124 | Bma-Chr3:948990 | 0 | wgd | |
Bma01g01879 | Bma-Chr1:69104163 | Bma04g00660 | Bma-Chr4:6354896 | 0 | wgd | |
Bma01g01879 | Bma-Chr1:69104163 | Bma08g00994 | Bma-Chr8:49032753 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma01g01879 | K03283 | - | rcu:8279580 | 1208.36 |